RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DEAF1O75398 565 aaPredicted RBP15.5■□□□□ 0.07
SNX1-203ENST00000558040 TIPRLO75663 272 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 OR1E2P47887 323 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 FBXW4P57775 412 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 NTRK2Q16620 822 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 NRF1Q16656 503 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 GLIPR1L2Q4G1C9 344 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 KLHL26Q53HC5 615 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 MRPL2Q5T653 305 aaKnown RBP15.5■□□□□ 0.07
SNX1-203ENST00000558040 FBXW10Q5XX13 1052 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 FCRLBQ6BAA4 426 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 LYPD8Q6UX82 237 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 ERMP1Q7Z2K6 904 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 PIWIL3Q7Z3Z3 882 aaKnown RBP15.5■□□□□ 0.07
SNX1-203ENST00000558040 CARM1Q86X55 608 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 GPALPP1Q8IXQ4 340 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 PQLC1Q8N2U9 271 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 TMEM156Q8N614 296 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 SIRT6Q8N6T7 355 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 SLC35B4Q969S0 331 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 ZNF347Q96SE7 839 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 ARHGDIGQ99819 225 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 TBL1XR1Q9BZK7 514 aa15.5■□□□□ 0.07
SNX1-203ENST00000558040 FAM32AQ9Y421 112 aaKnown RBP15.5■□□□□ 0.07
SNX1-203ENST00000558040 ALG1L2C9J202 215 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 hCG_2039718K7EN88 272 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 ZNF354AO60765 605 aaPredicted RBP15.49■□□□□ 0.07
SNX1-203ENST00000558040 CSTAP01040 98 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 LDLRP01130 860 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 MT-ND1P03886 318 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 WT1P19544 449 aaPredicted RBP15.49■□□□□ 0.07
SNX1-203ENST00000558040 TNFRSF1BP20333 461 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 EVI2BP34910 448 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 ADH7P40394 386 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 SOX3P41225 446 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 RGS8P57771 180 aaPredicted RBP15.49■□□□□ 0.07
SNX1-203ENST00000558040 VLDLRP98155 873 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 ZNF791Q3KP31 576 aaPredicted RBP15.49■□□□□ 0.07
SNX1-203ENST00000558040 ACER2Q5QJU3 275 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 ABHD17BQ5VST6 288 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 CYP4Z1Q86W10 505 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 GRAMD2AQ8IUY3 354 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 ZNF440Q8IYI8 595 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 CLIP4Q8N3C7 705 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 OR5M3Q8NGP4 307 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 VANGL1Q8TAA9 524 aaPredicted RBP15.49■□□□□ 0.07
SNX1-203ENST00000558040 APOBEC4Q8WW27 367 aaKnown RBP15.49■□□□□ 0.07
SNX1-203ENST00000558040 HGDQ93099 445 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 C7orf34Q96L11 122 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 HHATLQ9HCP6 504 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 AGPAT4Q9NRZ5 378 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 HPF1Q9NWY4 346 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 FLRT3Q9NZU0 649 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 ENPP4Q9Y6X5 453 aa15.49■□□□□ 0.07
SNX1-203ENST00000558040 CLDN24A6NM45 220 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 M0R3H8 397 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 CDK2AP1O14519 115 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 GNGT2O14610 69 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 CLOCKO15516 846 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 RRP8O43159 456 aaKnown RBP15.48■□□□□ 0.07
SNX1-203ENST00000558040 OR6B1O95007 311 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 EPPINO95925 133 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 CST1P01037 141 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 UBL4AP11441 157 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 CASRP41180 1078 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 SOX8P57073 446 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 SLC34A1Q06495 639 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 ATP6AP1Q15904 470 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 RANBP3LQ86VV4 465 aaPredicted RBP15.48■□□□□ 0.07
SNX1-203ENST00000558040 MISPQ8IVT2 679 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 GALNT16Q8N428 558 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 POGLUT1Q8NBL1 392 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 PHOSPHO1Q8TCT1 267 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 LRTOMTQ8WZ04 291 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 PSMF1Q92530 271 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 NR4A3Q92570 626 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 ZNF300Q96RE9 604 aaPredicted RBP15.48■□□□□ 0.07
SNX1-203ENST00000558040 SECISBP2Q96T21 854 aaKnown RBP15.48■□□□□ 0.07
SNX1-203ENST00000558040 PKP2Q99959 881 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 BDH2Q9BUT1 245 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 RSPO3Q9BXY4 272 aaPredicted RBP15.48■□□□□ 0.07
SNX1-203ENST00000558040 AMBRA1Q9C0C7 1298 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 ING2Q9H160 280 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 RLIMQ9NVW2 624 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 NDUFAF4Q9P032 175 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 DNAJB9Q9UBS3 223 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 CHST2Q9Y4C5 530 aa15.48■□□□□ 0.07
SNX1-203ENST00000558040 PIEZO1Q92508 2521 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 GTPBP1O00178 669 aaKnown RBP15.47■□□□□ 0.07
SNX1-203ENST00000558040 AP3D1O14617 1153 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 EFSO43281 561 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 NDUFB5O43674 189 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 FADS1O60427 444 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 MAN1A2O60476 641 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 RHCEP18577 417 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 IFNA8P32881 189 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 SNCBQ16143 134 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 FNDC7Q5VTL7 733 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 BROXQ5VW32 411 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 B3GNTL1Q67FW5 361 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms