RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 VEZF1Q14119 521 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CDKL4Q5MAI5 379 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TEX35Q5T0J7 233 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 DEPDC1Q5TB30 811 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 EEF1A1P5Q5VTE0 462 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 AP1ARQ63HQ0 302 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 MED27Q6P2C8 311 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TMEM81Q6P7N7 255 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 PODNL1Q6PEZ8 512 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 SCIMPQ6UWF3 145 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 ESPNLQ6ZVH7 1005 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 IFNEQ86WN2 208 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 EPHX4Q8IUS5 362 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 WDSUB1Q8N9V3 476 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 SPC24Q8NBT2 197 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 PDPRQ8NCN5 879 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 C17orf47Q8NEP4 570 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TRIM58Q8NG06 486 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 HUS1BQ8NHY5 278 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TMEM171Q8WVE6 324 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 NRG4Q8WWG1 115 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 EXT2Q93063 718 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 UBE2E3Q969T4 207 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 OMA1Q96E52 524 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 PGM2Q96G03 612 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 MTERF1Q99551 399 aaKnown RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 SLC39A3Q9BRY0 314 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CENPKQ9BS16 269 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CAB39LQ9H9S4 337 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 POPDC3Q9HBV1 291 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TMEM160Q9NX00 188 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 LYARQ9NX58 379 aaKnown RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TAS2R10Q9NYW0 307 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 EHD3Q9NZN3 535 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CD274Q9NZQ7 290 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 KLRF1Q9NZS2 232 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 ASIC3Q9UHC3 531 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 RPS6KA6Q9UK32 745 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 FBXL2Q9UKC9 423 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 DLGAP4Q9Y2H0 992 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 ASB4Q9Y574 426 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 SNX8Q9Y5X2 465 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 ANK3Q12955 4377 aaKnown RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 hCG_1807616A0A1W2PRN6 198 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 PRAMEF25A6NGN4 478 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 LRRC14BA6NHZ5 514 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 SLC22A20A6NK97 555 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 B4DXG7 233 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 PGRMC1O00264 195 aaKnown RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 AP3D1O14617 1153 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 HS3ST1O14792 307 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 PHF1O43189 567 aaPredicted RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 UGT2B11O75310 529 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 WNT11O96014 354 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 PLAUP00749 431 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 CGAP01215 116 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 GBAP04062 536 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 LPLP06858 475 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 FAM58BPP0C7Q3 252 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 CCDC166P0CW27 439 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 KITP10721 976 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 CD1DP15813 335 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 NAGAP17050 411 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 RAB6AP20340 208 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 IL11P20809 199 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 S1PR1P21453 382 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 TCEA1P23193 301 aaKnown RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 SRD5A2P31213 254 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 BSGP35613 385 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 KCNJ5P48544 419 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 FNTAP49354 379 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 PLCXD2Q0VAA5 305 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 SNTA1Q13424 505 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 FRG1Q14331 258 aaKnown RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 PPP1R7Q15435 360 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 CLEC12BQ2HXU8 276 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 OR52E8Q6IFG1 317 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 GRHL2Q6ISB3 625 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 AAGABQ6PD74 315 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF704Q6ZNC4 412 aaPredicted RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 RAPH1Q70E73 1250 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 LRRC70Q7Z2Q7 622 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 P4HA3Q7Z4N8 544 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 HIPK1Q86Z02 1210 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 PDIK1LQ8N165 341 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 OR7G1Q8NGA0 311 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 GRK7Q8WTQ7 553 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 UBTD2Q8WUN7 234 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 FIG4Q92562 907 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 CAVIN3Q969G5 261 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF845Q96IR2 970 aaPredicted RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 SFXN2Q96NB2 322 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 ITPAQ9BY32 194 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 REG4Q9BYZ8 158 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 CD244Q9BZW8 370 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 IQCGQ9H095 443 aaKnown RBP5.26□□□□□ -1.57
VPS33B-207ENST00000557470 OR10A4Q9H209 315 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 RHOJQ9H4E5 214 aa5.26□□□□□ -1.57
VPS33B-207ENST00000557470 DDX31Q9H8H2 851 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms