RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CLEC12BQ2HXU8 276 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 ZNF385BQ569K4 471 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 FIGNL1Q6PIW4 674 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 SH2D5Q6ZV89 423 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 SZRD1Q7Z422 152 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 LSRQ86X29 649 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 OR2L13Q8N349 312 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 ZNF611Q8N823 705 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 POC1BQ8TC44 478 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 CIDECQ96AQ7 238 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 S100PBPQ96BU1 408 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 CXorf56Q9H5V9 222 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 NPIPA5A0A0B4J1W7 369 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 EXOC1LA0A1B0GW35 172 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 NPIPA7E9PJI5 369 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 KIF2AO00139 706 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-210ENST00000557431 SOX30O94993 753 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 SOD3P08294 240 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 NPIPA8P0DM63 369 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 ACP2P11117 423 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 FCGR2AP12318 317 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 IMPDH1P20839 514 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 PTNP21246 168 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 ATP5F1P24539 256 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-210ENST00000557431 AGTR1P30556 359 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 SFTPDP35247 375 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 ACVR1BP36896 505 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 CLK3P49761 638 aaKnown RBP12.57□□□□□ -0.4
SLIRP-210ENST00000557431 PRR5P85299 388 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 C17orf67Q0P5P2 114 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 FAPQ12884 760 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 FGFBP1Q14512 234 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 ZNHIT3Q15649 155 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-210ENST00000557431 IMPG1Q17R60 797 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 CCNJQ5T5M9 372 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 GALNT18Q6P9A2 607 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 NUFIP2Q7Z417 695 aaKnown RBP12.57□□□□□ -0.4
SLIRP-210ENST00000557431 CCNYL1Q8N7R7 359 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 NOA1Q8NC60 698 aaKnown RBP12.57□□□□□ -0.4
SLIRP-210ENST00000557431 OR4C3Q8NH37 302 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 OR2V1Q8NHB1 315 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 GPR151Q8TDV0 419 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 ABHD3Q8WU67 409 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 TRIM44Q96DX7 344 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-210ENST00000557431 FMO2Q99518 471 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 TMEM204Q9BSN7 226 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 MYNNQ9NPC7 610 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 ZNF180Q9UJW8 692 aa12.57□□□□□ -0.4
SLIRP-210ENST00000557431 ATRQ13535 2644 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 IGLV3-32A0A0A0MS00 114 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 A0A1W2PRB8 838 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 LINC01387J3KSC0 135 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 OIP5O43482 229 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 NDUFB5O43674 189 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 SYNGR4O95473 234 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 PAX1P15863 534 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 PSMA4P25789 261 aaKnown RBP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 PRKAA2P54646 552 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 RPS4XP62701 263 aaKnown RBP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 PSPHP78330 225 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 SLC18A2Q05940 514 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 DMTNQ08495 405 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 LCP2Q13094 533 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 PLPPR5Q32ZL2 321 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 GLYR1Q49A26 553 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 HBMQ6B0K9 141 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 RELL1Q8IUW5 271 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 CLHC1Q8NHS4 586 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 SPATA3Q8NHX4 192 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 SRXN1Q9BYN0 137 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 MED17Q9NVC6 651 aa12.56□□□□□ -0.4
SLIRP-210ENST00000557431 GDF2Q9UK05 429 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 MCTS1Q9ULC4 181 aaKnown RBP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 MAGED1Q9Y5V3 778 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-210ENST00000557431 A0A087WUV0 522 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 IGHV3-15A0A0B4J1V0 119 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 AKAP10O43572 662 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 GCM2O75603 506 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 KCNH1O95259 989 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 ENO1P06733 434 aaKnown RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 PPP3CBP16298 524 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 GPC1P35052 558 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 PSMD4P55036 377 aaKnown RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 PKNOX1P55347 436 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 FOXF1Q12946 379 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 CD226Q15762 336 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 HMBOX1Q6NT76 420 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 ADAM5Q6NVV9 412 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 BEND4Q6ZU67 534 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 WDR75Q8IWA0 830 aaKnown RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 GTPBP8Q8N3Z3 284 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 MMGT1Q8N4V1 131 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 L3HYPDHQ96EM0 354 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 C16orf58Q96GQ5 468 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms