RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 EXOSC8Q96B26 276 aaKnown RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 FAIM2Q9BWQ8 316 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 POTEKPQ9BYX7 375 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 TAS2R9Q9NYW1 312 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 CPSF2Q9P2I0 782 aaKnown RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 PCTPQ9UKL6 214 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 C19orf53Q9UNZ5 99 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 SNX24Q9Y343 169 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 PLCE1Q9P212 2302 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 SVEP1Q4LDE5 3571 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 C7orf72A4D263 438 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 ABCD4O14678 606 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 LY6HO94772 140 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 UTS2O95399 124 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 ZNF17P17021 662 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 GZMKP49863 264 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 MANFP55145 182 aaKnown RBP11.09□□□□□ -0.63
PSEN1-221ENST00000557293 CARD18P57730 90 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 IFT88Q13099 833 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 RAB35Q15286 201 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 ZNF239Q16600 458 aaKnown RBP11.09□□□□□ -0.63
PSEN1-221ENST00000557293 DECR1Q16698 335 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 GRAMD1BQ3KR37 738 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 HBMQ6B0K9 141 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 GTF2IRD2BQ6EKJ0 949 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 FAM166AQ6J272 317 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 B3GLCTQ6Y288 498 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 GTF2IRD2Q86UP8 949 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 CCDC25Q86WR0 208 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 LRRC8AQ8IWT6 810 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 CTAGE3PQ8IX95 158 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 PLD6Q8N2A8 252 aaKnown RBP11.09□□□□□ -0.63
PSEN1-221ENST00000557293 PPM1NQ8N819 430 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 PTGR2Q8N8N7 351 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-221ENST00000557293 BANPQ8N9N5 519 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 SLC9A6Q92581 669 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 KISS1RQ969F8 398 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-221ENST00000557293 USB1Q9BQ65 265 aaKnown RBP11.09□□□□□ -0.63
PSEN1-221ENST00000557293 SRXN1Q9BYN0 137 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 ADAM19Q9H013 955 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 CHODLQ9H9P2 273 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 EML4Q9HC35 981 aaKnown RBP11.09□□□□□ -0.63
PSEN1-221ENST00000557293 PFDN4Q9NQP4 134 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 SLC35C2Q9NQQ7 365 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 FAIMQ9NVQ4 179 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 STOML1Q9UBI4 398 aa11.09□□□□□ -0.63
PSEN1-221ENST00000557293 A0A087WV62 115 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 A0A087WZY1 265 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 LOC100289279A0A1B0GTE1 492 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 A0A1W2PRB8 838 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 GXYLT2A0PJZ3 443 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 MYO1GB0I1T2 1018 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 H7C417 338 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 UPK1AO00322 258 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 KLHL2O95198 593 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 PGM3O95394 542 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 ZNF155Q12901 538 aaPredicted RBP11.08□□□□□ -0.64
PSEN1-221ENST00000557293 PPA1Q15181 289 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 FAM83EQ2M2I3 478 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 PLPPR5Q32ZL2 321 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 TECRLQ5HYJ1 363 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 TMEM201Q5SNT2 666 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 LETMD1Q6P1Q0 360 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
PSEN1-221ENST00000557293 OR4C3Q8NH37 302 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 PHF21BQ96EK2 531 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 RNF145Q96MT1 663 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 DHRS9Q9BPW9 319 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 TMEM185BQ9H7F4 350 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 BRF2Q9HAW0 419 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 MED17Q9NVC6 651 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 KLHL13Q9P2N7 655 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 PRSS50Q9UI38 385 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 MCM8Q9UJA3 840 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 KCNS2Q9ULS6 477 aa11.08□□□□□ -0.64
PSEN1-221ENST00000557293 ALG1L2C9J202 215 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 DLX3O60479 287 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 LYZL6O75951 148 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 YES1P07947 543 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 ITGA2P17301 1181 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 MAP3K8P41279 467 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 OR3A2P47893 321 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 CLK3P49761 638 aaKnown RBP11.07□□□□□ -0.64
PSEN1-221ENST00000557293 EFNA4P52798 201 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 SPOCK1Q08629 439 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 SQLEQ14534 574 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 TCHHL1Q5QJ38 904 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-221ENST00000557293 Q6ZT83 130 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 TRABD2AQ86V40 505 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 TDRPQ86YL5 185 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 SAMD14Q8IZD0 417 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-221ENST00000557293 FAM9CQ8IZT9 166 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 DEPDC4Q8N2C3 294 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 CEP112Q8N8E3 955 aa11.07□□□□□ -0.64
PSEN1-221ENST00000557293 C16orf78Q8WTQ4 265 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms