RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PLOD2O00469 737 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 HMGN4O00479 90 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PPM1DO15297 605 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 AQP9O43315 295 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ASNA1O43681 348 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SLC28A2O43868 658 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 HS6ST1O60243 411 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 GALR3O60755 368 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 JRKO75564 520 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 MFN2O95140 757 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SNAP29O95721 258 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 GPR75O95800 540 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 AIFM1O95831 613 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 C1QCP02747 245 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 C9P02748 559 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 WNT1P04628 370 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 IFNW1P05000 195 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 EIF2S1P05198 315 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 IFI6P09912 130 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PABPC4LP0CB38 370 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 NR2F6P10588 404 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 NR2F1P10589 423 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ANXA8P13928 327 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ETS2P15036 469 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 IL9P15248 144 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PORP16435 677 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 RHCEP18577 417 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 MATN1P21941 496 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PRKACGP22612 351 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CERS1P27544 350 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 AQP1P29972 269 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 RYKP34925 604 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 FEN1P39748 380 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 FASLGP48023 281 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 LSSP48449 732 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PXNP49023 591 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 KHKP50053 298 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CDK9P50750 372 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 MAPK10P53779 464 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CRISP3P54108 245 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PRKAG1P54619 331 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TPD52P55327 224 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 LIM2P55344 173 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 NXPH1P58417 271 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PPP2R2BQ00005 443 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 HSPB3Q12988 150 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 BIKQ13323 160 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 RUNX2Q13950 521 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CEBPEQ15744 281 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 NDUFA9Q16795 377 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 MICAQ29983 383 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZIK1Q3SY52 487 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 IQCCQ4KMZ1 466 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 DEFB134Q4QY38 66 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 LIN52Q52LA3 116 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 RBM48Q5RL73 367 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 ATAD3BQ5T9A4 648 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 C18orf63Q68DL7 685 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZNF529Q6P280 563 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 FAHD1Q6P587 224 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZCCHC12Q6PEW1 402 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZNF793Q6ZN11 406 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 RNF44Q7L0R7 432 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 VTCN1Q7Z7D3 282 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TRIM73Q86UV7 250 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 C11orf74Q86VG3 221 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 C17orf82Q86X59 251 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 EPHX4Q8IUS5 362 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 C8orf59Q8N0T1 100 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 OR4N4Q8N0Y3 316 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 LRRC25Q8N386 305 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZNF786Q8N393 782 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 DNAJC22Q8N4W6 341 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 LINC00471Q8N535 108 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 DEFB119Q8N690 84 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CSNK1A1LQ8N752 337 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 HORMAD2Q8N7B1 307 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 FRMD1Q8N878 549 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 AMER3Q8N944 861 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 Q8N9P0 234 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 ATG16L2Q8NAA4 619 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SETD9Q8NE22 299 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 OR10Q1Q8NGQ4 319 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 OR5AK3PQ8NH89 298 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 BBS10Q8TAM1 723 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 GIPC3Q8TF64 312 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 DNASE2BQ8WZ79 361 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 NR4A3Q92570 626 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TAMM41Q96BW9 452 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ELP4Q96EB1 424 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CNRIP1Q96F85 164 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 MARS2Q96GW9 593 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZNF681Q96N22 645 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 MUS81Q96NY9 551 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TRNT1Q96Q11 434 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZNF300Q96RE9 604 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 MYCBPQ99417 103 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 APOL4Q9BPW4 351 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 MAPKAP1Q9BPZ7 522 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms