RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GATSQ8NAP1 163 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 OR6Y1Q8NGX8 325 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 OR2W6PQ8NHA6 318 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 FAM110BQ8TC76 370 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 TWIST2Q8WVJ9 160 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.32■□□□□ 0.842e-6■■■■■ 54.4
ACTN1-220ENST00000556433 TRIM44Q96DX7 344 aaPredicted RBP20.32■□□□□ 0.84
ACTN1-220ENST00000556433 MTERF3Q96E29 417 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 PRRG4Q9BZD6 226 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 HHATLQ9HCP6 504 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 ZNF226Q9NYT6 803 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 TMEM233B4DJY2 109 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 EIF1AYO14602 144 aaKnown RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 CTIFO43310 598 aaKnown RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 NPHS1O60500 1241 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 NGFRP08138 427 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 ALOX5P09917 674 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 CD8BP10966 210 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 FOSL1P15407 271 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 TBXA2RP21731 343 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 UGT3A2Q3SY77 523 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 ARL13AQ5H913 290 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 PPP4R4Q6NUP7 873 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 ZCCHC12Q6PEW1 402 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 R3HCC1LQ7Z5L2 792 aaKnown RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 BANPQ8N9N5 519 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 WFDC11Q8NEX6 87 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 APOPT1Q96IL0 206 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 MED18Q9BUE0 208 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 GSX1Q9H4S2 264 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 EML4Q9HC35 981 aaKnown RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 DLL4Q9NR61 685 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 BEX4Q9NWD9 120 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 FBXO34Q9NWN3 711 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 MKS1Q9NXB0 559 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 PROCRQ9UNN8 238 aa20.31■□□□□ 0.84
ACTN1-220ENST00000556433 ZNF469Q96JG9 3925 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-220ENST00000556433 A0A087WZY1 265 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 C16orf97H3BN30 126 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 PIP5K1BO14986 540 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 AQP8O94778 261 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 FCGR2AP12318 317 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 HPGDP15428 266 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 DDX5P17844 614 aaKnown RBP20.3■□□□□ 0.84
ACTN1-220ENST00000556433 UGT2B10P36537 528 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 EIF1AXP47813 144 aaKnown RBP20.3■□□□□ 0.84
ACTN1-220ENST00000556433 PRIM2P49643 509 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 LRIG3Q6UXM1 1119 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 FAM214BQ7L5A3 538 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 ZAR1Q86SH2 424 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 GGNQ86UU5 652 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 WDR75Q8IWA0 830 aaKnown RBP20.3■□□□□ 0.84
ACTN1-220ENST00000556433 JADE3Q92613 823 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 OTUB1Q96FW1 271 aaPredicted RBP20.3■□□□□ 0.84
ACTN1-220ENST00000556433 MECRQ9BV79 373 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 UBQLN4Q9NRR5 601 aa20.3■□□□□ 0.84
ACTN1-220ENST00000556433 TMEM114B3SHH9 223 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 OPN1LWP04000 364 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 ZNF17P17021 662 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 HOXC12P31275 282 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 SLC6A8P48029 635 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 SERPINB4P48594 390 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 TRABD2AQ86V40 505 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 GTPBP8Q8N3Z3 284 aaPredicted RBP20.29■□□□□ 0.84
ACTN1-220ENST00000556433 COX18Q8N8Q8 333 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 AGR3Q8TD06 166 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 FAM120BQ96EK7 910 aaKnown RBP20.29■□□□□ 0.84
ACTN1-220ENST00000556433 POM121Q96HA1 1249 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 SH3YL1Q96HL8 342 aaPredicted RBP20.29■□□□□ 0.84
ACTN1-220ENST00000556433 PPP3R2Q96LZ3 170 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 ZCCHC3Q9NUD5 404 aaKnown RBP20.29■□□□□ 0.84
ACTN1-220ENST00000556433 SLC17A7Q9P2U7 560 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 GIMAP2Q9UG22 337 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 ATP6V1HQ9UI12 483 aa20.29■□□□□ 0.84
ACTN1-220ENST00000556433 NF1P21359 2839 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 A0A1W2PRB8 838 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 DEFB108AA8MXU0 73 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 SCDO00767 359 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 SIAH2O43255 324 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 PEX11AO75192 247 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 SPAG7O75391 227 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 CRYGSP22914 178 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 MAPK1P28482 360 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 LCN1P31025 176 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 HPCAL1P37235 193 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 MLC1Q15049 377 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 GUSBP1Q15486 140 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 CCNJQ5T5M9 372 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 CPTPQ5TA50 214 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 ZNF550Q7Z398 422 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 RIBC1Q8N443 379 aaPredicted RBP20.28■□□□□ 0.84
ACTN1-220ENST00000556433 OR7A2PQ8NGA2 310 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 OR10D3Q8NH80 312 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 ACTRT2Q8TDY3 377 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 ZBTB8AQ96BR9 441 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 PIK3IP1Q96FE7 263 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 CHMP6Q96FZ7 201 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 ZC3HAV1LQ96H79 300 aaKnown RBP20.28■□□□□ 0.84
ACTN1-220ENST00000556433 NPAS1Q99742 590 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms