RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ZIC3O60481 467 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 KERAO60938 352 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 ERN1O75460 977 aaKnown RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 TNFSF13O75888 250 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 S100BP04271 92 aaPredicted RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 RHOXF2BP0C7M4 288 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 NR2F6P10588 404 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 CYP4B1P13584 511 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 TCP1P17987 556 aaKnown RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 CHMP24386 653 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 CRABP2P29373 138 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 SPRP35270 261 aaPredicted RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 GP5P40197 560 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 TMED10P49755 219 aaKnown RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 LHX2P50458 406 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 XKP51811 444 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 RAP1GDS1P52306 607 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 HMGA2P52926 109 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 FHL2Q14192 279 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 RCAN2Q14206 197 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 BCL2A1Q16548 175 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 GRTP1Q5TC63 336 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 METTL2BQ6P1Q9 378 aaKnown RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 ZBED8Q8IZ13 594 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 TEX9Q8N6V9 391 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 OR4K14Q8NGD5 310 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 SPATA3Q8NHX4 192 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 RHEBL1Q8TAI7 183 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 TRPC4APQ8TEL6 797 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 PYROXD1Q8WU10 500 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 SNX33Q8WV41 574 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 IGFBPL1Q8WX77 278 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 CDKL2Q92772 493 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 STARD4Q96DR4 205 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 RAX2Q96IS3 184 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 MARK4Q96L34 752 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 WFIKKN1Q96NZ8 548 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 OR2B2Q9GZK3 357 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 QRSL1Q9H0R6 528 aaKnown RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 NXF5Q9H1B4 397 aaKnown RBP8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 CLCF1Q9UBD9 225 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 OPTCQ9UBM4 332 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 NDRG3Q9UGV2 375 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 ACOT9Q9Y305 439 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 SNX24Q9Y343 169 aa8.08□□□□□ -1.12
GTF2A1-204ENST00000556268 ROS1P08922 2347 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 EFCAB8A8MWE9 144 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 TO15178 435 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 EIF3HO15372 352 aaKnown RBP eCLIP8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 SEMA3DO95025 777 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 CRHP06850 196 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 GSTA2P09210 222 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 CPMP14384 443 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 PAX1P15863 534 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 PORP16435 677 aaPredicted RBP8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 DRD5P21918 477 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 GPX3P22352 226 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 PIK3R1P27986 724 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 LOXP28300 417 aaPredicted RBP8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 NEK2P51955 445 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 GPX6P59796 221 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 FAM27E3Q08E93 113 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 DDX39BQ13838 428 aaKnown RBP8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 ACKR1Q16570 336 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 PRICKLE4Q2TBC4 344 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 C19orf54Q5BKX5 351 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 RABL3Q5HYI8 236 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 OR52E8Q6IFG1 317 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 CYP20A1Q6UW02 462 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 ENPP6Q6UWR7 440 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 ANGPTL8Q6UXH0 198 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 MED12LQ86YW9 2145 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 KLHL7Q8IXQ5 586 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 GLB1L3Q8NCI6 653 aaPredicted RBP8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 TSPEARQ8WU66 669 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 RNF138Q8WVD3 245 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 INTS12Q96CB8 462 aaKnown RBP8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 NXNL1Q96CM4 212 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 REPS1Q96D71 796 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 GPR78Q96P69 363 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 NODALQ96S42 347 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 WDR41Q9HAD4 459 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 TRPS1Q9UHF7 1281 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 EIF3LQ9Y262 564 aaKnown RBP8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 CFL2Q9Y281 166 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 DTX4Q9Y2E6 619 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 RNF11Q9Y3C5 154 aa8.07□□□□□ -1.12
GTF2A1-204ENST00000556268 A0A1W2PNV4 684 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 SYCE1LA8MT33 242 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 H7C1Q1 480 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 CCDC188H7C350 402 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 PLOD2O00469 737 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 ACOX3O15254 700 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 HCRTR2O43614 444 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 SMPD2O60906 423 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 UGT2B11O75310 529 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 TGM6O95932 706 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 CGAP01215 116 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 GBAP04062 536 aa8.06□□□□□ -1.12
GTF2A1-204ENST00000556268 ATP1B1P05026 303 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms