RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CCNG2Q16589 344 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 HIST2H2ACQ16777 129 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 CR1LQ2VPA4 569 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 C18orf21Q32NC0 220 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 DEPDC1Q5TB30 811 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 HIST2H2BDQ6DRA6 164 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 HIST2H2AA3Q6FI13 130 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 OR5M10Q6IEU7 315 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 C11orf71Q6IPW1 123 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 STK32CQ86UX6 486 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 EXOC3L1Q86VI1 746 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 METTL25Q8N6Q8 603 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 KBTBD8Q8NFY9 601 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 OR7G1Q8NGA0 311 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 AENQ8WTP8 325 aaKnown RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF473Q8WTR7 871 aaKnown RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 HSD17B8Q92506 261 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 GFM2Q969S9 779 aaKnown RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 OMA1Q96E52 524 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 WDR34Q96EX3 536 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 GMPPAQ96IJ6 420 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 C8orf49Q96NF6 230 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 EGFL8Q99944 293 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 FAM167BQ9BTA0 163 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 SSBP3Q9BWW4 388 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 CACNG6Q9BXT2 260 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 MS4A8Q9BY19 250 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 STMN4Q9H169 189 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 PHF11Q9UIL8 331 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 CLEC4AQ9UMR7 237 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 COA3Q9Y2R0 106 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 VWA7Q9Y334 891 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF337Q9Y3M9 751 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 GLOD5A6NK44 160 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 SHISA9B4DS77 424 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 B4DXG7 233 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 SAP18O00422 153 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CLGNO14967 610 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 ACOX3O15254 700 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 RAMP1O60894 148 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CSF3P09919 207 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 FCGR2AP12318 317 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 MLNP12872 115 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CREB1P16220 341 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 TCP1P17987 556 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 ATF4P18848 351 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CD22P20273 847 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 S1PR1P21453 382 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 TTKP33981 857 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 SRP14P37108 136 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 MAGEA6P43360 314 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 SLC6A8P48029 635 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 HNRNPH2P55795 449 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 DSCR4P56555 118 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CLDN20P56880 219 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 RPS3AP61247 264 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 PLCXD2Q0VAA5 305 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 DOC2AQ14183 400 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 TAB1Q15750 504 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 NNATQ16517 81 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 SGCBQ16585 318 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 PAGE2BQ5JRK9 111 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 BEND6Q5SZJ8 279 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 DRICH1Q6PGQ1 229 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 GSTA5Q7RTV2 222 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CCDC103Q8IW40 242 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 KLHL7Q8IXQ5 586 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 SYCE1Q8N0S2 351 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 ZCCHC7Q8N3Z6 543 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 BANPQ8N9N5 519 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 HTRA1Q92743 480 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 GCDHQ92947 438 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 TMCO6Q96DC7 493 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 PTCD3Q96EY7 689 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 PBKQ96KB5 322 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 EFCAB11Q9BUY7 163 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 SORBS1Q9BX66 1292 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF696Q9H7X3 374 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CBLN4Q9NTU7 201 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 MOCS1Q9NZB8 636 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 EHD3Q9NZN3 535 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 CFL2Q9Y281 166 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
ATXN3-236ENST00000556220 OARD1Q9Y530 152 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 ASB4Q9Y574 426 aa6.07□□□□□ -1.44
ATXN3-236ENST00000556220 A0A1W2PR48 441 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 A0A1W2PS29 197 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 NPEPPSL1A6NEC2 478 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 OR6C70A6NIJ9 312 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 VWC2LB2RUY7 222 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 H3BQF6 201 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 PGRMC1O00264 195 aaKnown RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 PGRMC2O15173 223 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 TO15178 435 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 SEC14L5O43304 696 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 SS18L1O75177 396 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 CYP7B1O75881 506 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 PLGP00747 810 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 CCDC166P0CW27 439 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms