RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 HPGDP15428 266 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 ELAVL4P26378 380 aaKnown RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 PCGF2P35227 344 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 DNASE1L1P49184 302 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 HPCAP84074 193 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 LIPEQ05469 1076 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 MAPK14Q16539 360 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 FXNQ16595 210 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 TIGD3Q6B0B8 471 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 CCDC80Q76M96 950 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 OLIG3Q7RTU3 272 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 MISPQ8IVT2 679 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 DEFB107AQ8IZN7 70 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 ARHGAP24Q8N264 748 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 OR2T12Q8NG77 320 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 NFKBIDQ8NI38 313 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 BBS10Q8TAM1 723 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 SLC39A7Q92504 469 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 BBC3Q96PG8 261 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 TAAR6Q96RI8 345 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 CDRT15Q96T59 188 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 BARD1Q99728 777 aaKnown RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 OSBPL11Q9BXB4 747 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 TBL1XR1Q9BZK7 514 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 ALG2Q9H553 416 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 ZFP64Q9NPA5 681 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 WIF1Q9Y5W5 379 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 GPC6Q9Y625 555 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 EXPH5Q8NEV8 1989 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 NPIPA5A0A0B4J1W7 369 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 A0A0G2JMM0 328 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 A0A1W2PPB8 328 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 A0A1W2PRS3 328 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 ELOVL7A1L3X0 281 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 PRORSD1PA6NEY8 169 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 SERINC4A6NH21 518 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 KIR3DP1A8MWS1 328 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 C5orf58C9J3I9 102 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 NPIPA7E9PJI5 369 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 SNPHO15079 494 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 NDUFB5O43674 189 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 DBIP07108 87 aaKnown RBP11.58□□□□□ -0.56
SYNE2-219ENST00000555323 THBS1P07996 1170 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 NPIPA8P0DM63 369 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 HSD17B1P14061 328 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 HTR1EP28566 365 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 GSK3BP49841 420 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 MEOX1P50221 254 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 GPR85P60893 370 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 KCNJ2P63252 427 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 KCNJ10P78508 379 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 FGFBP1Q14512 234 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 ZSWIM7Q19AV6 140 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 PDZK1Q5T2W1 519 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 INTS11Q5TA45 600 aaKnown RBP11.58□□□□□ -0.56
SYNE2-219ENST00000555323 MARCH3Q86UD3 253 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 PTRH1Q86Y79 214 aaKnown RBP11.58□□□□□ -0.56
SYNE2-219ENST00000555323 CMIPQ8IY22 773 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 PEX5LQ8IYB4 626 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 FADS6Q8N9I5 356 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 DUSP19Q8WTR2 217 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 QRSL1Q9H0R6 528 aaKnown RBP11.58□□□□□ -0.56
SYNE2-219ENST00000555323 PIF1Q9H611 641 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 GALNT9Q9HCQ5 603 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-219ENST00000555323 TUBA8Q9NY65 449 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-219ENST00000555323 KLRF1Q9NZS2 232 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 BOKQ9UMX3 212 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-219ENST00000555323 ANGPT4Q9Y264 503 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 IFT52Q9Y366 437 aa11.58□□□□□ -0.56
SYNE2-219ENST00000555323 KMT2BQ9UMN6 2715 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-219ENST00000555323 CENPVL1A0A0U1RR11 272 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 C2orf72A6NCS6 295 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 LRRC3CA6NJW4 275 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 B4DXG7 233 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 G3V3Y1 287 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 H3BNH8 94 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 M0QX08 132 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 EBAG9O00559 213 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 SERPINB7O75635 380 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 CBR3O75828 277 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 PDE9AO76083 593 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 MFN2O95140 757 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 NID1P14543 1247 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 IL7RP16871 459 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 MSX1P28360 303 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 PGM1P36871 562 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 RASSF2P50749 326 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 MXRA7P84157 204 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 INPP5JQ15735 1006 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-219ENST00000555323 CD226Q15762 336 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 RPS26P11Q5JNZ5 115 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-219ENST00000555323 SAMD4BQ5PRF9 694 aaKnown RBP11.57□□□□□ -0.56
SYNE2-219ENST00000555323 ZNF324BQ6AW86 544 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-219ENST00000555323 PATL1Q86TB9 770 aaKnown RBP11.57□□□□□ -0.56
SYNE2-219ENST00000555323 IFNEQ86WN2 208 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 KRT73Q86Y46 540 aa11.57□□□□□ -0.56
SYNE2-219ENST00000555323 PLCZ1Q86YW0 608 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms