RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 RAC1P63000 192 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 DMTNQ08495 405 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 VEZF1Q14119 521 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 SLC29A2Q14542 456 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 GRAMD1BQ3KR37 738 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 TIFABQ6ZNK6 161 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 EXOC3L1Q86VI1 746 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 MISPQ8IVT2 679 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 GTPBP8Q8N3Z3 284 aaPredicted RBP13.86□□□□□ -0.19
NEDD1-207ENST00000555114 OR2V1Q8NHB1 315 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 CEP70Q8NHQ1 597 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 ZFP28Q8NHY6 868 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 GPR151Q8TDV0 419 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 AKAP1Q92667 903 aaKnown RBP eCLIP13.86□□□□□ -0.19
NEDD1-207ENST00000555114 CCDC126Q96EE4 140 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 TMEM204Q9BSN7 226 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 HDHD5Q9BXW7 423 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 MID1IP1Q9NPA3 183 aa13.86□□□□□ -0.19
NEDD1-207ENST00000555114 RRAGDQ9NQL2 400 aaPredicted RBP13.86□□□□□ -0.19
NEDD1-207ENST00000555114 C7orf72A4D263 438 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 ADAMDEC1O15204 470 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 CXCL13O43927 109 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 RSL1D1O76021 490 aaKnown RBP13.85□□□□□ -0.19
NEDD1-207ENST00000555114 FESP07332 822 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 NGFRP08138 427 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 HSPB3Q12988 150 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 TNK1Q13470 666 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.85□□□□□ -0.19
NEDD1-207ENST00000555114 CLEC12BQ2HXU8 276 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 CPTPQ5TA50 214 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 HBMQ6B0K9 141 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 CDRT4Q8N9R6 151 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 ACTRT2Q8TDY3 377 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 SLC9A6Q92581 669 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 GTPBP3Q969Y2 492 aaKnown RBP13.85□□□□□ -0.19
NEDD1-207ENST00000555114 KCNA7Q96RP8 456 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 EQTNQ9NQ60 294 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 TIGARQ9NQ88 270 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 LAMP3Q9UQV4 416 aa13.85□□□□□ -0.19
NEDD1-207ENST00000555114 POLR3HQ9Y535 204 aaPredicted RBP13.85□□□□□ -0.19
NEDD1-207ENST00000555114 A0A1W2PRB8 838 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 GXYLT2A0PJZ3 443 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 SCDO00767 359 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 TNFSF11O14788 317 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 PDPK1O15530 556 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 PLAUP00749 431 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 GSTA1P08263 222 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 LCN1P31025 176 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 IDUAP35475 653 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 CTU2Q2VPK5 515 aaKnown RBP13.84□□□□□ -0.19
NEDD1-207ENST00000555114 GLE1Q53GS7 698 aaKnown RBP13.84□□□□□ -0.19
NEDD1-207ENST00000555114 TMEM201Q5SNT2 666 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 HEPHL1Q6MZM0 1159 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 ALKBH2Q6NS38 261 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 ADAM5Q6NVV9 412 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 APOOLQ6UXV4 268 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 SZRD1Q7Z422 152 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 GALNT10Q86SR1 603 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 CCNYL1Q8N7R7 359 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 OR6Y1Q8NGX8 325 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.84□□□□□ -0.191e-12■■■■■ 35.3
NEDD1-207ENST00000555114 ACMSDQ8TDX5 336 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 PIK3R3Q92569 461 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 FBXW5Q969U6 566 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 METTL2AQ96IZ6 378 aaKnown RBP13.84□□□□□ -0.19
NEDD1-207ENST00000555114 ADGRG7Q96K78 797 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 RNF145Q96MT1 663 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 USB1Q9BQ65 265 aaKnown RBP13.84□□□□□ -0.19
NEDD1-207ENST00000555114 ESRP2Q9H6T0 727 aaKnown RBP13.84□□□□□ -0.19
NEDD1-207ENST00000555114 C12orf49Q9H741 205 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 MED17Q9NVC6 651 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 RNF115Q9Y4L5 304 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 FBN3Q75N90 2809 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 ROS1P08922 2347 aa13.84□□□□□ -0.19
NEDD1-207ENST00000555114 GJE1A6NN92 205 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 NKX2-2O95096 273 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 OXSR1O95747 527 aaPredicted RBP13.83□□□□□ -0.2
NEDD1-207ENST00000555114 HSPA4LO95757 839 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 IFNA2P01563 188 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 CD3EP07766 207 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 IL32P24001 234 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 AGTR1P30556 359 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 EIF1P41567 113 aaKnown RBP13.83□□□□□ -0.2
NEDD1-207ENST00000555114 PRKAG1P54619 331 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 CARD18P57730 90 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 SLC18A2Q05940 514 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 RNPS1Q15287 305 aaKnown RBP13.83□□□□□ -0.2
NEDD1-207ENST00000555114 WHAMMP3Q1A5X7 153 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 PRSS53Q2L4Q9 553 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 PLPPR5Q32ZL2 321 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 NOXRED1Q6NXP6 359 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 TRIM46Q7Z4K8 759 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 TRABD2AQ86V40 505 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 CPNE4Q96A23 557 aaPredicted RBP13.83□□□□□ -0.2
NEDD1-207ENST00000555114 S100PBPQ96BU1 408 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 ZBED6CLQ96FA7 236 aaPredicted RBP13.83□□□□□ -0.2
NEDD1-207ENST00000555114 KLHL15Q96M94 604 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 MS4A4EQ96PG1 132 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 GSTO2Q9H4Y5 243 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 UBQLN4Q9NRR5 601 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms