RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 YES1P07947 543 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 TSPAN19P0C672 248 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 RPS5P46782 204 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 CSNK1EP49674 416 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 SNRPD2P62316 118 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 EFR3AQ14156 821 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 SLC35F1Q5T1Q4 408 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 ABHD13Q7L211 337 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 VWA5B2Q8N398 1253 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 GPR32P1Q8NGA4 272 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 OR4D11Q8NGI4 311 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 ZNF681Q96N22 645 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 QRSL1Q9H0R6 528 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 ACOXLQ9NUZ1 547 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 LYARQ9NX58 379 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 P2RX2Q9UBL9 471 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 DAPP1Q9UN19 280 aa13.68□□□□□ -0.22
PPP4R3A-201ENST00000554308 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 IQCMA0A1B0GVH7 501 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 AKR7A2O43488 359 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 OR10H3O60404 316 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 LDB3O75112 727 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 OSMP13725 252 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 TNNI3P19429 210 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 SDC2P34741 201 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ETV5P41161 510 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 HTR2BP41595 481 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ETV1P50549 477 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ARFIP1P53367 373 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 STARD6P59095 220 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 GNG2P59768 71 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ELOCQ15369 112 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 DEFB133Q30KQ1 61 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 C6orf132Q5T0Z8 1188 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 PDZK1Q5T2W1 519 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 MEX3DQ86XN8 651 aaKnown RBP13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 YIPF7Q8N8F6 280 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 FAM181AQ8N9Y4 354 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ELP4Q96EB1 424 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 SHDQ96IW2 340 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 FRMD6Q96NE9 622 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 CITED4Q96RK1 184 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 MND1Q9BWT6 205 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 SLA2Q9H6Q3 261 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 RNF121Q9H920 327 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 WNT16Q9UBV4 365 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 PRKYO43930 277 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 CCNYL3P0C7X3 344 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 APEX1P27695 318 aaKnown RBP13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ARPC4P59998 168 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 SNRPGP62308 76 aaKnown RBP13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 PRR5P85299 388 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 OR2G6Q5TZ20 316 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 BHLHB9Q6PI77 547 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ARL14Q8N4G2 192 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 CSNK1A1LQ8N752 337 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ATP6V1C2Q8NEY4 427 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 NUP43Q8NFH3 380 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 APOBEC4Q8WW27 367 aaKnown RBP13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 ZNF607Q96SK3 696 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 NELL2Q99435 816 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 TVP23BQ9NYZ1 205 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 KCND3Q9UK17 655 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 CLCA2Q9UQC9 943 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 LRP4O75096 1905 aa13.67□□□□□ -0.22
PPP4R3A-201ENST00000554308 TLX2O43763 284 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 UBXN7O94888 489 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 ALPPP05187 535 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 SMIM10L1P0DMW3 83 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 ELAVL4P26378 380 aaKnown RBP13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 PPP2R1BP30154 601 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 NUDT1P36639 197 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 RPS25P62851 125 aaKnown RBP13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 ELOAQ14241 798 aaKnown RBP13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 DEF8Q6ZN54 512 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 FAM92BQ6ZTR7 304 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 RFPL4BQ6ZWI9 263 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 SLC30A8Q8IWU4 369 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 AVL9Q8NBF6 648 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 SMIM10Q96HG1 83 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 TM9SF2Q99805 663 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 TBC1D17Q9HA65 648 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 TOR4AQ9NXH8 423 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 CLCA3PQ9Y6N3 262 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 A0A1W2PR77 199 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 SLC9B1P1A6NJY1 282 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 SGK494L7N484 410 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 MYL12BO14950 172 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 MAN2A2P49641 1150 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 TCTN3Q6NUS6 607 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 XKRXQ6PP77 449 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 CASP12Q6UXS9 341 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 ZFP41Q8N8Y5 198 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 OR4K14Q8NGD5 310 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 OR52I1Q8NGK6 324 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 C10orf90Q96M02 699 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms