RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 IARS2Q9NSE4 1012 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 BEX4Q9NWD9 120 aaPredicted RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 KLHL28Q9NXS3 571 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 GAR1Q9NY12 217 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 UTP6Q9NYH9 597 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 PAK5Q9P286 719 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 KLHL42Q9P2K6 505 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CLCF1Q9UBD9 225 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ANAPC5Q9UJX4 755 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 FBXO5Q9UKT4 447 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ACAD8Q9UKU7 415 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ERVK-11Q9UQG0 969 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF148Q9UQR1 794 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 PSAT1Q9Y617 370 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 FBN3Q75N90 2809 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SVEP1Q4LDE5 3571 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 USF3Q68DE3 2245 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ARID1AO14497 2285 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 TUBAL3A6NHL2 446 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HSPB2A8KAH6 182 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 RNF212BA8MTL3 300 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 C17orf105B2RV13 164 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 E5RI56 91 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SAP18O00422 153 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 PGRMC2O15173 223 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 CTIFO43310 598 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ERI3O43414 337 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 TMPRSS11DO60235 418 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 CTNSO60931 367 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 EEDO75530 441 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 MLYCDO95822 493 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HPNP05981 417 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SERPINA6P08185 405 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SLC35G6P0C7Q6 338 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 C1GALT1C1LP0DN25 315 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 EDNRAP25101 427 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ATP5A1P25705 553 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 IVDP26440 423 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 PTPN6P29350 595 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 AHRP35869 848 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HSD17B2P37059 387 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 CDK9P50750 372 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 CCR8P51685 355 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ARFIP2P53365 341 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SUCLG1P53597 346 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 B3GALT5-AS1P59052 145 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 RAB1AP62820 205 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 AP2B1P63010 937 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HERVK_113P63132 956 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ERVK-8P63133 956 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 DLG1Q12959 904 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 EBPQ15125 230 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 GUSBP1Q15486 140 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HSPB2Q16082 182 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ACKR1Q16570 336 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 CCNG2Q16589 344 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 NTRK2Q16620 822 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 MPEG1Q2M385 716 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 NHSL2Q5HYW2 709 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 WLSQ5T9L3 541 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 NDUFAF5Q5TEU4 345 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HMBOX1Q6NT76 420 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 FAM180BQ6P0A1 224 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 C18orf65Q6ZTR6 163 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 PEX26Q7Z412 305 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SLC22A16Q86VW1 577 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 GPSM1Q86YR5 675 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 CNTN4Q8IWV2 1026 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 CCDC170Q8IYT3 715 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SPARTQ8N0X7 666 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 LRRC75A-AS1Q8N1F1 130 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 FBXW8Q8N3Y1 598 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 RASGEF1CQ8N431 466 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 RAB42Q8N4Z0 105 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 OTUD6BQ8N6M0 293 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ARIH2OSQ8N7S6 290 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF615Q8N8J6 731 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 WDSUB1Q8N9V3 476 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 FAM83FQ8NEG4 500 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 RAB3IL1Q8TBN0 382 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SPPL2AQ8TCT8 520 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 MCOLN3Q8TDD5 553 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 WIPF2Q8TF74 440 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF473Q8WTR7 871 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 FIG4Q92562 907 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HGDQ93099 445 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF524Q96C55 264 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 INTS12Q96CB8 462 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 RHBDF1Q96CC6 855 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SPACA9Q96E40 222 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 PIK3IP1Q96FE7 263 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SENP5Q96HI0 755 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 MS4A14Q96JA4 679 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 JSRP1Q96MG2 331 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 HS6ST2Q96MM7 605 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 PIP5K1AQ99755 562 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 EBNA1BP2Q99848 306 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 RBM24Q9BX46 236 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 TSSK1BQ9BXA7 367 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms