RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DUS3LQ96G46 650 aaKnown RBP13.33□□□□□ -0.28
SHMT2-210ENST00000553950 PYURFQ96I23 114 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 TPD52L3Q96J77 140 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 HSH2DQ96JZ2 352 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 LMF1Q96S06 567 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 UTP23Q9BRU9 249 aaKnown RBP13.33□□□□□ -0.28
SHMT2-210ENST00000553950 METTL7AQ9H8H3 244 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 LIN28AQ9H9Z2 209 aaKnown RBP13.33□□□□□ -0.28
SHMT2-210ENST00000553950 EXOSC3Q9NQT5 275 aaKnown RBP13.33□□□□□ -0.28
SHMT2-210ENST00000553950 KLRF1Q9NZS2 232 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 KCNMB2Q9Y691 235 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 URB1O60287 2271 aaKnown RBP13.33□□□□□ -0.28
SHMT2-210ENST00000553950 CEP295Q9C0D2 2601 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 SERINC4A6NH21 518 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 GCM2O75603 506 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 CEACAM4O75871 244 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 OR6B1O95007 311 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 IFNW1P05000 195 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 UBL4AP11441 157 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 CD247P20963 164 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 SLC7A1P30825 629 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 IFNA8P32881 189 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 SUMO3P55854 103 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 FBXW4P57775 412 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 OC90Q02509 493 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 DMTNQ08495 405 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 KLHL26Q53HC5 615 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 FCRLBQ6BAA4 426 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 BORAQ6PGQ7 559 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF550Q7Z398 422 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 ZAR1Q86SH2 424 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 GALNT10Q86SR1 603 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 RANBP3LQ86VV4 465 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 POGLUT1Q8NBL1 392 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 TOR1AIP2Q8NFQ8 470 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 PAQR8Q8TEZ7 354 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 RNF138Q8WVD3 245 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 HGDQ93099 445 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 OSBPL11Q9BXB4 747 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 POLR2J2Q9GZM3 115 aaKnown RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 POLR2J3Q9H1A7 115 aaKnown RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 ZBTB20Q9HC78 741 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 TIMMDC1Q9NPL8 285 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 STMN3Q9NZ72 180 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 TESQ9UGI8 421 aaKnown RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 RAXQ9Y2V3 346 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 PCDHGB7Q9Y5F8 929 aa13.32□□□□□ -0.28
SHMT2-210ENST00000553950 PCDHGA9Q9Y5G4 932 aaKnown RBP13.32□□□□□ -0.28
SHMT2-210ENST00000553950 CDHR4A6H8M9 788 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 C1QTNF9BB2RNN3 333 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 NDUFB5O43674 189 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 PRKD3O94806 890 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 LGI1O95970 557 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 CSTAP01040 98 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 P04436 131 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 ITGB2P05107 769 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 FESP07332 822 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 C1QTNF9P0C862 333 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 SLC6A8P48029 635 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 CRYBA2P53672 197 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 RGS8P57771 180 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 EEF1A1P68104 462 aaKnown RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 KCNJ10P78508 379 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 ELF3P78545 371 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 MRPL2Q5T653 305 aaKnown RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 B3GNTL1Q67FW5 361 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 SLC30A6Q6NXT4 461 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 IL20RBQ6UXL0 311 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF836Q6ZNA1 936 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 C16orf47Q6ZP98 133 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 CYP4Z1Q86W10 505 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 VRK2Q86Y07 508 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 ADGRG5Q8IZF4 528 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 SMYD1Q8NB12 490 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 OR10G3Q8NGC4 313 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 SNRNP27Q8WVK2 155 aaKnown RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 QRSL1Q9H0R6 528 aaKnown RBP13.31□□□□□ -0.28
SHMT2-210ENST00000553950 FBXO34Q9NWN3 711 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 AURKCQ9UQB9 309 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 WIF1Q9Y5W5 379 aa13.31□□□□□ -0.28
SHMT2-210ENST00000553950 NPIPA5A0A0B4J1W7 369 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 ANKRD33BA6NCL7 494 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 OR5H15A6NDH6 313 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 NPIPA7E9PJI5 369 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 MKRN2OSH3BPM6 223 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 GTPBP1O00178 669 aaKnown RBP13.3□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF264O43296 627 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 FADS1O60427 444 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 EIF4E2O60573 245 aaKnown RBP13.3□□□□□ -0.28
SHMT2-210ENST00000553950 FMO6PO60774 539 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 DNAJB5O75953 348 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 SNX4O95219 450 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 FABP3P05413 133 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 NPIPA8P0DM63 369 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 CCL11P51671 97 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 C17orf67Q0P5P2 114 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 GK3PQ14409 553 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 NRF1Q16656 503 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 SLC22A10Q63ZE4 541 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms