RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ANKUB1A6NFN9 424 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 FAM47E-STBD1D6RA91 191 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 GTPBP1O00178 669 aaKnown RBP12.63□□□□□ -0.39
TUBB3-202ENST00000553656 FCMRO60667 390 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 CBR3O75828 277 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 CHRM4P08173 479 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 BMP2P12643 396 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 GPX2P18283 190 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 NUDT2P50583 147 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 TDGF1P3P51864 188 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 GAS1P54826 345 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 CHRNEQ04844 493 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 FUT5Q11128 374 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 IGFBP7Q16270 282 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 FNDC7Q5VTL7 733 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 TYW3Q6IPR3 259 aaKnown RBP12.63□□□□□ -0.39
TUBB3-202ENST00000553656 ARPINQ7Z6K5 226 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 MTERF4Q7Z6M4 381 aaKnown RBP12.63□□□□□ -0.39
TUBB3-202ENST00000553656 TREML1Q86YW5 311 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 PEX5LQ8IYB4 626 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 WDSUB1Q8N9V3 476 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 OR8J3Q8NGG0 315 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 DUSP19Q8WTR2 217 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 SLC38A5Q8WUX1 472 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 SLC39A3Q9BRY0 314 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 ZDHHC11Q9H8X9 412 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 TRGV5A0A0B4J1U4 118 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 NPIPB9F8W1W9 429 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 HCRTR2O43614 444 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 GMFGO60234 142 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 TNFRSF21O75509 655 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 PDE9AO76083 593 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 NUDT7P0C024 238 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 TFPTP0C1Z6 253 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 RFPL3SP0C7P2 107 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 SLC6A2P23975 617 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 MSX1P28360 303 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 GANABQ14697 944 aaKnown RBP12.62□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF141Q15928 474 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 KLHL26Q53HC5 615 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 CMPK2Q5EBM0 449 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 ARHGAP11AQ6P4F7 1023 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 APOOLQ6UXV4 268 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 FRRS1Q6ZNA5 592 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 OLIG3Q7RTU3 272 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 TMCO5AQ8N6Q1 288 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 METTL25Q8N6Q8 603 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 OR14L1PQ8NHC6 308 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 BBS10Q8TAM1 723 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 PMM1Q92871 262 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 MAL2Q969L2 176 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 NTNG2Q96CW9 530 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 TMEM19Q96HH6 336 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 TREX2Q9BQ50 279 aaPredicted RBP12.62□□□□□ -0.39
TUBB3-202ENST00000553656 ECSITQ9BQ95 431 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 TRIM8Q9BZR9 551 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 SAP130Q9H0E3 1048 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 SLC38A1Q9H2H9 487 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 DSN1Q9H410 356 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 IKZF5Q9H5V7 419 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 MTHFD2LQ9H903 347 aaPredicted RBP12.62□□□□□ -0.39
TUBB3-202ENST00000553656 MED11Q9P086 117 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 SUCOQ9UBS9 1254 aaKnown RBP12.62□□□□□ -0.39
TUBB3-202ENST00000553656 FBXL2Q9UKC9 423 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 ANGPT4Q9Y264 503 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 AP3M1Q9Y2T2 418 aa12.62□□□□□ -0.39
TUBB3-202ENST00000553656 BSNQ9UPA5 3926 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 KALRNO60229 2985 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 A0A0G2JPF8 293 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 PRAMEF27A3QJZ7 478 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 SERINC4A6NH21 518 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 HNRNPCL2B2RXH8 293 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 HNRNPCL3B7ZW38 293 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 J3QKU1 62 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 FXYD1O00168 92 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 HNRNPCL1O60812 293 aaKnown RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 UGT2B17O75795 530 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 ZIC2O95409 532 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 CBX6O95503 412 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 DBIP07108 87 aaKnown RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 CELA3AP09093 270 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 HNRNPCL4P0DMR1 293 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 ARAFP10398 606 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 UBL4AP11441 157 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 ABOP16442 354 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 DPP4P27487 766 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 SRD5A2P31213 254 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 RNF144AP50876 292 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 CASP6P55212 293 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 DSCR4P56555 118 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 CDK6Q00534 326 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 PRAMEF8Q5VWM4 474 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 PRAMEF7Q5VXH5 474 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 NANOGP8Q6NSW7 305 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 EIF3MQ7L2H7 374 aaKnown RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 SERPINA11Q86U17 422 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 KRT73Q86Y46 540 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms