RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PRKD3O94806 890 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 PGM3O95394 542 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 CTAGE8P0CG41 777 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 ME2P23368 584 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 CD40P25942 277 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 ALDH9A1P49189 494 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF83P51522 516 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 PSG6Q00889 435 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 CSTF3Q12996 717 aaKnown RBP12.16□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF239Q16600 458 aaKnown RBP12.16□□□□□ -0.46
PRPF39-204ENST00000553605 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 CPTPQ5TA50 214 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 KLHL17Q6TDP4 642 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 DEF8Q6ZN54 512 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 RINLQ6ZS11 566 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 PEG10Q86TG7 708 aaKnown RBP12.16□□□□□ -0.46
PRPF39-204ENST00000553605 CTAGE4Q8IX94 777 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 PLD6Q8N2A8 252 aaKnown RBP12.16□□□□□ -0.46
PRPF39-204ENST00000553605 GTPBP8Q8N3Z3 284 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF418Q8TF45 676 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-204ENST00000553605 TM4SF18Q96CE8 201 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 UBXN10Q96LJ8 280 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 TRMOQ9BU70 441 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 TSPY26PQ9H489 355 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 MYOZ1Q9NP98 299 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-204ENST00000553605 PFDN4Q9NQP4 134 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 TAS2R9Q9NYW1 312 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 PRSS50Q9UI38 385 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 TEX264Q9Y6I9 313 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 A0A087WZY1 265 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 OR5H1A6NKK0 313 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 DNALI1O14645 258 aaPredicted RBP12.15□□□□□ -0.46
PRPF39-204ENST00000553605 RGS9O75916 674 aaPredicted RBP12.15□□□□□ -0.46
PRPF39-204ENST00000553605 ANGPTL1O95841 491 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 STMN1P16949 149 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 PSMA4P25789 261 aaKnown RBP12.15□□□□□ -0.46
PRPF39-204ENST00000553605 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
PRPF39-204ENST00000553605 ILF2Q12905 390 aaKnown RBP12.15□□□□□ -0.46
PRPF39-204ENST00000553605 CYP27C1Q4G0S4 372 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 AWAT1Q58HT5 328 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 TREML4Q6UXN2 200 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 ISCA2Q86U28 154 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 TRIM58Q8NG06 486 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 OR9A2Q8NGT5 310 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 FAM110BQ8TC76 370 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 CPNE4Q96A23 557 aaPredicted RBP12.15□□□□□ -0.46
PRPF39-204ENST00000553605 MTBPQ96DY7 904 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 KLHL15Q96M94 604 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 RNF145Q96MT1 663 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 SORCS2Q96PQ0 1159 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 ATOH8Q96SQ7 321 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 RBM4Q9BWF3 364 aaKnown RBP12.15□□□□□ -0.46
PRPF39-204ENST00000553605 TBL1XR1Q9BZK7 514 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 MYNNQ9NPC7 610 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 TIGARQ9NQ88 270 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 NSMCE4AQ9NXX6 385 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 UTS2RQ9UKP6 389 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 ATP23Q9Y6H3 246 aa12.15□□□□□ -0.46
PRPF39-204ENST00000553605 IL33O95760 270 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 PCMT1P22061 227 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 IL2RGP31785 369 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 OR3A2P47893 321 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 MORF4L2Q15014 288 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 PPP1R7Q15435 360 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 DECR1Q16698 335 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 FCRLAQ7L513 359 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 COMMD6Q7Z4G1 85 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 LILRA2Q8N149 483 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 METTL4Q8N3J2 472 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 L3MBTL4Q8NA19 623 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 GRK7Q8WTQ7 553 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 SLC9A6Q92581 669 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 HPS1Q92902 700 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 ZBTB8AQ96BR9 441 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 LRRC39Q96DD0 335 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 FAIM2Q9BWQ8 316 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 ACOT9Q9Y305 439 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
PRPF39-204ENST00000553605 NPIPA5A0A0B4J1W7 369 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 C7orf72A4D263 438 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 NPIPA7E9PJI5 369 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 M0R1B8 84 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 KERAO60938 352 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 PIAS1O75925 651 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 CLDN9O95484 217 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 NPIPA8P0DM63 369 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 COX5AP20674 150 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 APEX1P27695 318 aaKnown RBP12.13□□□□□ -0.47
PRPF39-204ENST00000553605 SFTPDP35247 375 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 CHN2P52757 468 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms