RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 PRAF2O60831 178 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 NOS1APO75052 506 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 FGF18O76093 207 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SOX30O94993 753 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 UBL3O95164 117 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 AK1P00568 194 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 LALBAP00709 142 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SERPINA3P01011 423 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 MT-ND5P03915 603 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CSF2P04141 144 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 HMGN2P05204 90 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TPOP07202 933 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 LINC00271P0C7V0 271 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ALPPL2P10696 532 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ACP5P13686 325 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 F3P13726 295 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CELP19835 753 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 HIST1H1TP22492 207 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ATP5A1P25705 553 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 STOMP27105 288 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 MPIP34949 423 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 BTCP35070 178 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CCR2P41597 374 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 PITPNBP48739 271 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 INPP1P49441 399 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 RAB28P51157 221 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 MMP15P51511 669 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 NCBP2P52298 156 aaKnown RBP eCLIP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 RGS8P57771 180 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ERVK-21P61565 698 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 PITPNAQ00169 270 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TNP2Q05952 138 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 PRDX1Q06830 199 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TGM3Q08188 693 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 BAMBIQ13145 260 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 DUSP8Q13202 625 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 DYRK1AQ13627 763 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 GALEQ14376 348 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 GPR176Q14439 515 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 P2RY14Q15391 338 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 BTBD16Q32M84 506 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 FAM214AQ32MH5 1076 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 FAM209AQ5JX71 171 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 C9orf64Q5T6V5 341 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC22A10Q63ZE4 541 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TYW3Q6IPR3 259 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF793Q6ZN11 406 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 IDO2Q6ZQW0 420 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CXXC5Q7LFL8 322 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 RRM2BQ7LG56 351 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 BCDIN3DQ7Z5W3 292 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TRIM48Q8IWZ4 208 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SYS1Q8N2H4 156 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 LNX2Q8N448 690 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC44A3Q8N4M1 653 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 MS4A15Q8N5U1 240 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 LRRC17Q8N6Y2 441 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 OR4M1Q8NGD0 313 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 OR5D16Q8NGK9 328 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SUN5Q8TC36 379 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ADAMTS14Q8WXS8 1223 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC9A6Q92581 669 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SNAPC3Q92966 411 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 KISS1RQ969F8 398 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TMEM203Q969S6 136 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ARRDC3Q96B67 414 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 VWCEQ96DN2 955 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 MS4A6EQ96DS6 147 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CNRIP1Q96F85 164 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SENP5Q96HI0 755 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SCLYQ96I15 445 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 LCORQ96JN0 433 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF681Q96N22 645 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 OR7D2Q96RA2 312 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 BBS4Q96RK4 519 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SECISBP2Q96T21 854 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 WFDC6Q9BQY6 131 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 WACQ9BTA9 647 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 MRI1Q9BV20 369 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ACTRT3Q9BYD9 372 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 IRF2BPLQ9H1B7 796 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 DPAGT1Q9H3H5 408 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ZCCHC4Q9H5U6 513 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 EGLN3Q9H6Z9 239 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 PLEKHA1Q9HB21 404 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CACYBPQ9HB71 228 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CAPN10Q9HC96 672 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 HINT3Q9NQE9 182 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 POLE3Q9NRF9 147 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CMC2Q9NRP2 79 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CUEDC1Q9NWM3 386 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 BABAM2Q9NXR7 383 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ABRACLQ9P1F3 81 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 NLKQ9UBE8 527 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 COMMD3Q9UBI1 195 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TRPC4Q9UBN4 977 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TNFRSF10DQ9UBN6 386 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 EIF3KQ9UBQ5 218 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms