RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PDK4Q16654 411 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 TIMM50Q3ZCQ8 353 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 MEDAGQ5VYS4 303 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 UFSP1Q6NVU6 142 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 TMEM17Q86X19 198 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 CDC20BQ86Y33 519 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 C9orf40Q8IXQ3 194 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 Q8N9G6 341 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-210ENST00000553455 ZSCAN4Q8NAM6 433 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-210ENST00000553455 OR9A4Q8NGU2 314 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 CNIH3Q8TBE1 160 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 SPRYD4Q8WW59 207 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-210ENST00000553455 TMEM80Q96HE8 168 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.92□□□□□ -1.78
SYNE2-210ENST00000553455 AATFQ9NY61 560 aaKnown RBP eCLIP3.92□□□□□ -1.78
SYNE2-210ENST00000553455 CRLS1Q9UJA2 301 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 L3MBTL1Q9Y468 752 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 SPACA6W5XKT8 324 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 POGZQ7Z3K3 1410 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 ATP10DQ9P241 1426 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 GSAPA4D1B5 854 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 A8MUI8 341 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 CDX4O14627 284 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-210ENST00000553455 H2AFZP0C0S5 128 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 PDHBP11177 359 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 ATP6V1C1P21283 382 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 TBXA2RP21731 343 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 IGHV1-2P23083 117 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 PSMA5P28066 241 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 MAGEA9P43362 315 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 ARFIP1P53367 373 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 RND3P61587 244 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 EWSR1Q01844 656 aaKnown RBP eCLIP3.91□□□□□ -1.78
SYNE2-210ENST00000553455 RGS1Q08116 209 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 SELPLGQ14242 412 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 ANKDD1AQ495B1 522 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 RABGAP1LQ5R372 815 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 CGB2Q6NT52 195 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 ACSM5Q6NUN0 579 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 SCYL2Q6P3W7 929 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 GPR65Q8IYL9 337 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 KLHL30-AS1Q8NEE0 82 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 TFB1MQ8WVM0 346 aaKnown RBP3.91□□□□□ -1.78
SYNE2-210ENST00000553455 TXN2Q99757 166 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 ALG12Q9BV10 488 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 MIEF1Q9NQG6 463 aa3.91□□□□□ -1.78
SYNE2-210ENST00000553455 BCAS1O75363 584 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-210ENST00000553455 DUSP14O95147 198 aaKnown RBP3.9□□□□□ -1.79
SYNE2-210ENST00000553455 F10P00742 488 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 CD55P08174 381 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 HBQ1P09105 142 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 PGAM2P15259 253 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 RPA2P15927 270 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 FASP25445 335 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 ATP5A1P25705 553 aaKnown RBP3.9□□□□□ -1.79
SYNE2-210ENST00000553455 OTX2P32243 289 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 IFNAR2P48551 515 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 RGS4P49798 205 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 BDH1Q02338 343 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 LRRC70Q7Z2Q7 622 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 SERPINA9Q86WD7 417 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 MARCH9Q86YJ5 346 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 HPS6Q86YV9 775 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 CSNK1A1LQ8N752 337 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 OR2T33Q8NG76 320 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 OR2T3Q8NH03 318 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 PNPT1Q8TCS8 783 aaKnown RBP3.9□□□□□ -1.79
SYNE2-210ENST00000553455 FAM3CQ92520 227 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 RPL3LQ92901 407 aaKnown RBP3.9□□□□□ -1.79
SYNE2-210ENST00000553455 SDSLQ96GA7 329 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 TEX13BQ9BXU2 312 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 IKZF5Q9H5V7 419 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 PNO1Q9NRX1 252 aaKnown RBP3.9□□□□□ -1.79
SYNE2-210ENST00000553455 RSPH14Q9UHP6 348 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 OR10H1Q9Y4A9 318 aa3.9□□□□□ -1.79
SYNE2-210ENST00000553455 NOL4O94818 638 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 GIG44P09565 113 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-210ENST00000553455 UQCRC2P22695 453 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 CALRP27797 417 aaKnown RBP3.89□□□□□ -1.79
SYNE2-210ENST00000553455 XCR1P46094 333 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 GNPDA1P46926 289 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 FNTAP49354 379 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 PLA2G16P53816 162 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 ST3GAL3Q11203 375 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 QRICH1Q2TAL8 776 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 TIGITQ495A1 244 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 TEX44Q53QW1 395 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 PAN3Q58A45 887 aaKnown RBP3.89□□□□□ -1.79
SYNE2-210ENST00000553455 ATAD3CQ5T2N8 411 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 OR8G2PQ6IF36 304 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 ZNF774Q6NX45 483 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 BLOC1S2Q6QNY1 142 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 KIAA1328Q86T90 577 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 MCOLN2Q8IZK6 566 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 SLC39A11Q8N1S5 342 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 LRRC43Q8N309 656 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 DENND6BQ8NEG7 585 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 MYLPFQ96A32 169 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 CCT8L2Q96SF2 557 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms