RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 OR5F1O95221 314 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ITIH1P19827 911 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 HTR2AP28223 471 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ELK4P28324 431 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 RPS6KA3P51812 740 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 DCAF7P61962 342 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 TCF15Q12870 199 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ILKQ13418 452 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 APOFQ13790 326 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 DECR1Q16698 335 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 LAIR2Q6ISS4 152 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF517Q6ZMY9 492 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 Q6ZPB1 254 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 PLEKHM3Q6ZWE6 761 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 OR4K5Q8NGD3 323 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 CNOT9Q92600 299 aaKnown RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 EFHD2Q96C19 240 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ULBP3Q9BZM4 244 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ANKRD19PQ9H560 264 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 GMPPBQ9Y5P6 360 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 A0A087WUU8 490 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 IL33O95760 270 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 SLC5A2P31639 672 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 FGFBP1Q14512 234 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 TRAM2Q15035 370 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 OTOGLQ3ZCN5 2332 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 FAM199XQ6PEV8 388 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ZER1Q7Z7L7 766 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 RANBP3LQ86VV4 465 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF614Q8N883 585 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 NFAM1Q8NET5 270 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 GAL3ST4Q96RP7 486 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 DGCR6LQ9BY27 220 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 NRSN2Q9GZP1 204 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 WWTR1Q9GZV5 400 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 ING2Q9H160 280 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 WDR54Q9H977 334 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 PPIEQ9UNP9 301 aaKnown RBP18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 OR6C76A6NM76 312 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 FMO6PO60774 539 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 ADAM11O75078 769 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 RFPL3O75679 317 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 PSMD4P55036 377 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 E2F1Q01094 437 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 MEP1AQ16819 746 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 GDF7Q7Z4P5 450 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 SLCO6A1Q86UG4 719 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 LINC00471Q8N535 108 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF441Q8N8Z8 693 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 APCDD1LQ8NCL9 501 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 METTL21AQ8WXB1 218 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 SLC41A3Q96GZ6 507 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 CDC6Q99741 560 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 WDR77Q9BQA1 342 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 SEMA4CQ9C0C4 833 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 PARD6AQ9NPB6 346 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 DNAJB12Q9NXW2 375 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 AKAP7Q9P0M2 348 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 REV1Q9UBZ9 1251 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF223Q9UK11 482 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 LOXL2Q9Y4K0 774 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 B3GALT1Q9Y5Z6 326 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 SAGE2PA6NJ88 616 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 SMNDC1O75940 238 aaKnown RBP eCLIP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 NTN1O95631 604 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 KLK3P07288 261 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 ETV5P41161 510 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 TPD52P55327 224 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 CLDN6P56747 220 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 TARDBPQ13148 414 aaKnown RBP eCLIP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 CSRP2Q16527 193 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 CDCP2Q5VXM1 449 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 TMEM205Q6UW68 189 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 B3GNT7Q8NFL0 401 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 TSPAN14Q8NG11 270 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 SLC38A4Q969I6 547 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 CRB3Q9BUF7 120 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 YTHDF1Q9BYJ9 559 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 TOR4AQ9NXH8 423 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 FLRT3Q9NZU0 649 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 PCDHGA6Q9Y5G7 932 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 HSPE1-MOB4S4R3N1 261 aa18.03■□□□□ 0.48
RBFOX1-215ENST00000553186 TO15178 435 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 CYC1P08574 325 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 MMP11P24347 488 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 IFNA8P32881 189 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 ISXQ2M1V0 245 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 KLHL26Q53HC5 615 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 C1orf94Q6P1W5 598 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 FAM198BQ6UWH4 519 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 NKAIN4Q8IVV8 208 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 SETD9Q8NE22 299 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 GPA33Q99795 319 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 UCK2Q9BZX2 261 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 POLR2J2Q9GZM3 115 aaKnown RBP18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 POLR2J3Q9H1A7 115 aaKnown RBP18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 EVA1AQ9H8M9 152 aa18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 TESQ9UGI8 421 aaKnown RBP18.02■□□□□ 0.48
RBFOX1-215ENST00000553186 KIF26BQ2KJY2 2108 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms