RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SNAI3Q3KNW1 292 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 TIGITQ495A1 244 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 HSP90AB3PQ58FF7 597 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 SLX4IPQ5VYV7 408 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 FAM219BQ5XKK7 198 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 WSCD1Q658N2 575 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 ACSM5Q6NUN0 579 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 RUFY3Q7L099 469 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 CEACAM19Q7Z692 300 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 MOB3BQ86TA1 216 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 NBPF5PQ86XG9 351 aaPredicted RBP3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 KLHDC8BQ8IXV7 354 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 METTL4Q8N3J2 472 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 AQP11Q8NBQ7 271 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 TRPV1Q8NER1 839 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 OR10A7Q8NGE5 316 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 CNIH3Q8TBE1 160 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 SLC2A14Q8TDB8 520 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 TBCKQ8TEA7 893 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 RAB3CQ96E17 227 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 MTMR9Q96QG7 549 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 SYT15Q9BQS2 421 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 SLC39A3Q9BRY0 314 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 DUSP16Q9BY84 665 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 ROPN1BQ9BZX4 212 aaPredicted RBP3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 STRADBQ9C0K7 418 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 RNF41Q9H4P4 317 aaPredicted RBP3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 MCCC2Q9HCC0 563 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 GLRX2Q9NS18 164 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 DDX18Q9NVP1 670 aaKnown RBP3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 BARX2Q9UMQ3 279 aaPredicted RBP3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 MRPS28Q9Y2Q9 187 aaKnown RBP3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 MEMO1Q9Y316 297 aa3.31□□□□□ -1.88
LSM6P2-201ENST00000552208 TTC21BQ7Z4L5 1316 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 LRP5LA4QPB2 252 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 C11orf98E9PRG8 122 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 PRKAB2O43741 272 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 TRIM3O75382 744 aaPredicted RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 CTAG2O75638 210 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 DUS4LO95620 317 aaKnown RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 NUDT14O95848 222 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 IGLV1-44P01699 117 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 ASGR1P07306 291 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 IGFBP1P08833 259 aaPredicted RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 PRRX1P54821 245 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 RPL8P62917 257 aaKnown RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 RGS1Q08116 209 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 SRSF5Q13243 272 aaKnown RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 SIX1Q15475 284 aaPredicted RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 C17orf58Q2M2W7 97 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 CTSL3PQ5NE16 218 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 ACER2Q5QJU3 275 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 PRAMEF5Q5TYX0 476 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 PRAMEF6Q5VXH4 476 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 KCNIP4Q6PIL6 250 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 CCDC80Q76M96 950 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 CLEC4FQ8N1N0 589 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 UBE2J2Q8N2K1 259 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 BPIFB2Q8N4F0 458 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 NECAB1Q8N987 351 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 ZSCAN4Q8NAM6 433 aaPredicted RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 C17orf47Q8NEP4 570 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 STXBP6Q8NFX7 210 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 BRSK1Q8TDC3 778 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 AENQ8WTP8 325 aaKnown RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 TADA1Q96BN2 335 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 TUBGCP2Q9BSJ2 902 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 CHRDL1Q9BU40 450 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 CCDC28BQ9BUN5 200 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 ZNF696Q9H7X3 374 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 ELL3Q9HB65 397 aaPredicted RBP3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 RAB20Q9NX57 234 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 SPATA7Q9P0W8 599 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 SEC14L3Q9UDX4 400 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 ASIC3Q9UHC3 531 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 GAB2Q9UQC2 676 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 SCML2Q9UQR0 700 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 TIMM10BQ9Y5J6 103 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 USP16Q9Y5T5 823 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 SCN5AQ14524 2016 aa3.3□□□□□ -1.88
LSM6P2-201ENST00000552208 IGLV4-3A0A075B6K6 122 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 A0A1W2PPE3 182 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 G3V4G9 280 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 UPK3AO75631 287 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 PGK1P00558 417 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 IGHG4P01861 327 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 CFC1P0CG37 223 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 ATP5A1P25705 553 aaKnown RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 CDH5P33151 784 aaPredicted RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 EFNB2P52799 333 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 MFAP2P55001 183 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 BDH1Q02338 343 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 OC90Q02509 493 aaPredicted RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 RAB40BQ12829 278 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 SLC15A2Q16348 729 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 SSX2Q16385 188 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 MS4A18Q3C1V0 323 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms