RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TMEM201Q5SNT2 666 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 SHEQ5VZ18 495 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 MFSD12Q6NUT3 480 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 KLC3Q6P597 504 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 OLIG3Q7RTU3 272 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF551Q7Z340 670 aaPredicted RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 ATP6V1C2Q8NEY4 427 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 LILRB1Q8NHL6 650 aaPredicted RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 DCAKDQ8WVC6 231 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 IFT81Q8WYA0 676 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 ROBO4Q8WZ75 1007 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 CIDECQ96AQ7 238 aaPredicted RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 SH3YL1Q96HL8 342 aaPredicted RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 EGLN2Q96KS0 407 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 BTBD9Q96Q07 612 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 TMEM237Q96Q45 408 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 BBS4Q96RK4 519 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 SECISBP2Q96T21 854 aaKnown RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 NTMT1Q9BV86 223 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 CDC42EP4Q9H3Q1 356 aaKnown RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 FETUBQ9UGM5 382 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 NDRG3Q9UGV2 375 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 UTP11Q9Y3A2 253 aaKnown RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 POLR3HQ9Y535 204 aaPredicted RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 IKBKGQ9Y6K9 419 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF780BQ9Y6R6 833 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 FREM1Q5H8C1 2179 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 IGHV3-15A0A0B4J1V0 119 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CCDC189A1A4V9 331 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 SYNDIG1LA6NDD5 238 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 OR6C70A6NIJ9 312 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 C16orf97H3BN30 126 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 TNFSF11O14788 317 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 MSTNO14793 375 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 TO15178 435 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 ACOX3O15254 700 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CLOCKO15516 846 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 ARHGEF9O43307 516 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 AKAP10O43572 662 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 HCRTR2O43614 444 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CXCL13O43927 109 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 GPRIN2O60269 458 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 UGDHO60701 494 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 UTS2O95399 124 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 GSTA2P09210 222 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 ANXA4P09525 319 aaPredicted RBP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 NAGAP17050 411 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 GCAP28676 217 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CASQ1P31415 396 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 GABRA3P34903 492 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 KRT20P35900 424 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 MAGEA12P43365 314 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 NCBP2P52298 156 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 PRKAG1P54619 331 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 ATP5J2P56134 94 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 RPP38P78345 283 aaKnown RBP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 PSG6Q00889 435 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 C2orf80Q0P641 193 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 DOC2BQ14184 412 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 SGCBQ16585 318 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF385BQ569K4 471 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 SPDYAQ5MJ70 313 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CCNJQ5T5M9 372 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 AAGABQ6PD74 315 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 STAC2Q6ZMT1 411 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF704Q6ZNC4 412 aaPredicted RBP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CYS1Q717R9 158 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CHMP1BQ7LBR1 199 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 PAGE2Q7Z2X7 111 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 NUFIP2Q7Z417 695 aaKnown RBP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 GGNQ86UU5 652 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 MRPL41Q8IXM3 137 aaKnown RBP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 FADS6Q8N9I5 356 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 NOA1Q8NC60 698 aaKnown RBP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 C17orf47Q8NEP4 570 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 CLHC1Q8NHS4 586 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 METTL6Q8TCB7 284 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 TMCO6Q96DC7 493 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 SLC35A4Q96G79 324 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 C16orf58Q96GQ5 468 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 PAFAH2Q99487 392 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 PIGMQ9H3S5 423 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 SLC35C2Q9NQQ7 365 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 AHSPQ9NZD4 102 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 SENP1Q9P0U3 644 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 STOML1Q9UBI4 398 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 VPS29Q9UBQ0 182 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 GIMAP2Q9UG22 337 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 EDARQ9UNE0 448 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 PROCRQ9UNN8 238 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 LAMP3Q9UQV4 416 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 FIS1Q9Y3D6 152 aa6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 TNPO3Q9Y5L0 923 aaKnown RBP6.12□□□□□ -1.43
PRPF40B-214ENST00000551320 ANK2Q01484 3957 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 RAI1Q7Z5J4 1906 aaPredicted RBP6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SLC22A31A6NKX4 558 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 UPK1AO00322 258 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 EFNA2O43921 213 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 RAMP1O60894 148 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 OTCP00480 354 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms