RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 ZNF350Q9GZX5 532 aa17.62■□□□□ 0.41
DDX54-207ENST00000550016 FAM107BQ9H098 131 aa17.62■□□□□ 0.41
DDX54-207ENST00000550016 FAM53CQ9NYF3 392 aa17.62■□□□□ 0.41
DDX54-207ENST00000550016 SLC25A37Q9NYZ2 338 aa17.62■□□□□ 0.41
DDX54-207ENST00000550016 MED11Q9P086 117 aa17.62■□□□□ 0.41
DDX54-207ENST00000550016 WDR45Q9Y484 360 aa17.62■□□□□ 0.41
DDX54-207ENST00000550016 ARHGAP21Q5T5U3 1957 aa17.62■□□□□ 0.41
DDX54-207ENST00000550016 TRGV8A0A0C4DH27 118 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 PRAMEF27A3QJZ7 478 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 B4DXG7 233 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 PRRG2O14669 202 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 ETFAP13804 333 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 PPIBP23284 216 aaKnown RBP17.61■□□□□ 0.41
DDX54-207ENST00000550016 SRD5A2P31213 254 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 CA7P43166 264 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 FUT5Q11128 374 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 GPR68Q15743 365 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 C4orf17Q53FE4 359 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 EIPR1Q53HC9 387 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 WIPI1Q5MNZ9 446 aaPredicted RBP17.61■□□□□ 0.41
DDX54-207ENST00000550016 C1QL3Q5VWW1 255 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 DLEU7Q6UYE1 221 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 MTERF4Q7Z6M4 381 aaKnown RBP17.61■□□□□ 0.41
DDX54-207ENST00000550016 YRDCQ86U90 279 aaKnown RBP17.61■□□□□ 0.41
DDX54-207ENST00000550016 MSRB3Q8IXL7 192 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 DPP10Q8N608 796 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 GATSQ8NAP1 163 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 RELTQ969Z4 430 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 TRNT1Q96Q11 434 aaKnown RBP17.61■□□□□ 0.41
DDX54-207ENST00000550016 SAP130Q9H0E3 1048 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 PTGES2Q9H7Z7 377 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 THUMPD1Q9NXG2 353 aaKnown RBP17.61■□□□□ 0.41
DDX54-207ENST00000550016 VAPAQ9P0L0 249 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 MKLN1Q9UL63 735 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 SLC5A6Q9Y289 635 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 DTNAQ9Y4J8 743 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 GMEB1Q9Y692 573 aa17.61■□□□□ 0.41
DDX54-207ENST00000550016 PCNX1Q96RV3 2341 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 TRBV5-3A0A0A0MS03 114 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 CLEC18AA5D8T8 446 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 NPIPA2E9PIF3 369 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 NPIPA3F8WFD2 350 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 H3BNH8 94 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 BCKDKO14874 412 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 SLC22A2O15244 555 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 LRRTM2O43300 516 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 CCDC22O60826 627 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 NR2F1P10589 423 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 DPP4P27487 766 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 MSX1P28360 303 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 DSCR4P56555 118 aaPredicted RBP17.6■□□□□ 0.41
DDX54-207ENST00000550016 DSTNP60981 165 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 SRSF1Q07955 248 aaKnown RBP eCLIP17.6■□□□□ 0.41
DDX54-207ENST00000550016 RGNQ15493 299 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 MAPRE2Q15555 327 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 ZNF141Q15928 474 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 SYPL1Q16563 259 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 C3AR1Q16581 482 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 CLEC18BQ6UXF7 455 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 OLIG3Q7RTU3 272 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 RETREG3Q86VR2 466 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 DOLPP1Q86YN1 238 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 ANKFN1Q8N957 763 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 CLEC18CQ8NCF0 446 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 OR14L1PQ8NHC6 308 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 PHOSPHO1Q8TCT1 267 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 SARAFQ96BY9 339 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 TAS2R10Q9NYW0 307 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 SPRR3Q9UBC9 169 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 DKKL1Q9UK85 242 aa17.6■□□□□ 0.41
DDX54-207ENST00000550016 KIAA0513O60268 411 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 ZIC3O60481 467 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 SNX3O60493 162 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 SEMA7AO75326 666 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 ZIC2O95409 532 aaPredicted RBP17.59■□□□□ 0.41
DDX54-207ENST00000550016 H6PDO95479 791 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 TPOP07202 933 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 ENDOUP21128 410 aaKnown RBP17.59■□□□□ 0.41
DDX54-207ENST00000550016 HPCAP84074 193 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 FADDQ13158 208 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 GANABQ14697 944 aaKnown RBP17.59■□□□□ 0.41
DDX54-207ENST00000550016 CD226Q15762 336 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 PDZK1Q5T2W1 519 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 TYW3Q6IPR3 259 aaKnown RBP17.59■□□□□ 0.41
DDX54-207ENST00000550016 FRRS1Q6ZNA5 592 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 LRRC74BQ6ZQY2 392 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 ZNF619Q8N2I2 560 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 FAM26EQ8N5C1 309 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 OIT3Q8WWZ8 545 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 P2RX2Q9UBL9 471 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.59■□□□□ 0.41
DDX54-207ENST00000550016 KCNE5Q9UJ90 142 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 SH3BGRL2Q9UJC5 107 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 TINAGQ9UJW2 476 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 ACAD8Q9UKU7 415 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 SLC6A5Q9Y345 797 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 CAPN7Q9Y6W3 813 aa17.59■□□□□ 0.41
DDX54-207ENST00000550016 C15orf38-AP3S2A0A0A6YYH1 394 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 EVPLLA8MZ36 301 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 GTPBP1O00178 669 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms