RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KCNAB2Q13303 367 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 EBPQ15125 230 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 HLA-BQ31612 363 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CT45A2Q5DJT8 189 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 FGD3Q5JSP0 725 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PAGE3Q5JUK9 113 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 RIPPLY2Q5TAB7 128 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 NAIF1Q69YI7 327 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 Q6ZS52 159 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CCDC121Q6ZUS5 278 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 NDUFAF7Q7L592 441 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 HDDC2Q7Z4H3 204 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 EPHX4Q8IUS5 362 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 NETO2Q8NC67 525 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 NRG4Q8WWG1 115 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 FIG4Q92562 907 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PTX4Q96A99 478 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 TEX37Q96LM6 180 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 MBOAT4Q96T53 435 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 C9orf16Q9BUW7 83 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 FOLH1BQ9HBA9 442 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PDE7BQ9NP56 450 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 C19orf25Q9UFG5 118 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 KLHL21Q9UJP4 597 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 MRTO4Q9UKD2 239 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 TDRKHQ9Y2W6 561 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SUPT3HB4E1H0 165 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 POC1B-GALNT4F8VUJ3 575 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 H0YGG7 62 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 RFXAPO00287 272 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SCDO00767 359 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ADAMDEC1O15204 470 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SUPT3HO75486 399 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SORBS2O94875 1100 aaKnown RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MED26O95402 600 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SLC35G6P0C7Q6 338 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 G6PDP11413 515 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 PCMT1P22061 227 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MMP11P24347 488 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 OTX1P32242 354 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 PEX19P40855 299 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ARF3P61204 181 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 KIF19Q2TAC6 998 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ASCL4Q6XD76 172 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 DHDDSQ86SQ9 333 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 TMEM156Q8N614 296 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 GPR32P1Q8NGA4 272 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ADAMTS15Q8TE58 950 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SGF29Q96ES7 293 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MRGPRX4Q96LA9 322 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 APOLD1Q96LR9 279 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 UBL7Q96S82 380 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 PRORYQ9H606 182 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 FKRPQ9H9S5 495 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF391Q9UJN7 358 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 KDELR2P33947 212 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 BUD31P41223 144 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 PSG6Q00889 435 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 HHEXQ03014 270 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ROM1Q03395 351 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SCARB2Q14108 478 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 TRAM1Q15629 374 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 TBC1D25Q3MII6 688 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 LAIR2Q6ISS4 152 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MBOAT2Q6ZWT7 520 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF550Q7Z398 422 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 LYSMD2Q8IV50 215 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 GID4Q8IVV7 300 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 CCDC36Q8IYA8 594 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 IL22RA1Q8N6P7 574 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 DNAJA4Q8WW22 397 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SORCS1Q8WY21 1168 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 FAM120BQ96EK7 910 aaKnown RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ZBTB18Q99592 522 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SOSTQ9BQB4 213 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ALG12Q9BV10 488 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 PALMDQ9NP74 551 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 BAG5Q9UL15 447 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ELOVL7A1L3X0 281 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ARPC2O15144 300 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ADAM11O75078 769 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 UGT2B11O75310 529 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 AQP8O94778 261 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 HLA-DQB1P01920 261 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 BGLAPP02818 100 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MT-ND2P03891 347 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MELTFP08582 738 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 LIPCP11150 499 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 FSTP19883 344 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 NOS3P29474 1203 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MPIP34949 423 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ACTR1BP42025 376 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 DMWDQ09019 674 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 GAB1Q13480 694 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 KPNB1Q14974 876 aaKnown RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MOGQ16653 247 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 KCTD16Q68DU8 428 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 BEST3Q8N1M1 668 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 PQLC1Q8N2U9 271 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms