RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 RPS3AP61247 264 aaKnown RBP15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 FGFBP1Q14512 234 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 DUSP5Q16690 384 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 SZRD1Q7Z422 152 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 SLC16A11Q8NCK7 471 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 OR4C3Q8NH37 302 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 CEP70Q8NHQ1 597 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 FAM110BQ8TC76 370 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 TWIST2Q8WVJ9 160 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 SLC9A6Q92581 669 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 NPAS1Q99742 590 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 GSX1Q9H4S2 264 aaPredicted RBP15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 SIRT3Q9NTG7 399 aaPredicted RBP15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 SH3BP4Q9P0V3 963 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 VDAC3Q9Y277 283 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 ARID1AO14497 2285 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 C7orf72A4D263 438 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 KCNK2O95069 426 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 CHEK2O96017 543 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 BCKDHAP12694 445 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 POU2F1P14859 743 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 HOXB4P17483 251 aaPredicted RBP15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 EFNA1P20827 205 aaPredicted RBP15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 CRYGSP22914 178 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 SLC6A8P48029 635 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 PRKAG1P54619 331 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 MANFP55145 182 aaKnown RBP15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 CTU2Q2VPK5 515 aaKnown RBP15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 UGT3A2Q3SY77 523 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 GALNTL6Q49A17 601 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 FIGNL1Q6PIW4 674 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 GTPBP8Q8N3Z3 284 aaPredicted RBP15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 GATSQ8NAP1 163 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 MTERF3Q96E29 417 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 OTUB1Q96FW1 271 aaPredicted RBP15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 ADGRG7Q96K78 797 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 MARK4Q96L34 752 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 KLHDC3Q9BQ90 382 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 MED18Q9BUE0 208 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 NEUROD4Q9HD90 331 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 FBXO34Q9NWN3 711 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 ELOVL5Q9NYP7 299 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 GIMAP2Q9UG22 337 aa15.62■□□□□ 0.09
CHMP1A-205ENST00000548650 HEATR5AQ86XA9 2040 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 A0A087WZY1 265 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 EIF1AYO14602 144 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 PIP5K1BO14986 540 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 NDUFB5O43674 189 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 TBXA2RP21731 343 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 PSMA4P25789 261 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 ALDH3A1P30838 453 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 ASMTP46597 345 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 PLPPR5Q32ZL2 321 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 XKR7Q5GH72 579 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 FAM214BQ7L5A3 538 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 ZNF550Q7Z398 422 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 TRABD2AQ86V40 505 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 DDIASQ8IXT1 998 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 BANPQ8N9N5 519 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 ZNF610Q8N9Z0 462 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 OR6Y1Q8NGX8 325 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 OR2W6PQ8NHA6 318 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 FAM120BQ96EK7 910 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 C16orf58Q96GQ5 468 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 SLC39A3Q9BRY0 314 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 MECRQ9BV79 373 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 IQCGQ9H095 443 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 L2HGDHQ9H9P8 463 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 ZNF226Q9NYT6 803 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 PROCRQ9UNN8 238 aa15.61■□□□□ 0.09
CHMP1A-205ENST00000548650 DSCAMO60469 2012 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 ROS1P08922 2347 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 NUP214P35658 2090 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 A0A1W2PRB8 838 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 C16orf97H3BN30 126 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 SCAMP2O15127 329 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 NPHS1O60500 1241 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 FGF4P08620 206 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 LCN1P31025 176 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 HPCAL1P37235 193 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 EIF1AXP47813 144 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 MLC1Q15049 377 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 CD226Q15762 336 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 SGCBQ16585 318 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 ARL13AQ5H913 290 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 CCNJQ5T5M9 372 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 C22orf34Q6ZV56 151 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 COX18Q8N8Q8 333 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 OR10D3Q8NH80 312 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 JADE3Q92613 823 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 ZBTB8AQ96BR9 441 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 PIK3IP1Q96FE7 263 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 HS3ST6Q96QI5 342 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 HHATLQ9HCP6 504 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 ZCCHC3Q9NUD5 404 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 MED17Q9NVC6 651 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 SLC17A7Q9P2U7 560 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 ATP6V1HQ9UI12 483 aa15.6■□□□□ 0.09
CHMP1A-205ENST00000548650 TRAF6Q9Y4K3 522 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms