RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 SLC16A12Q6ZSM3 486 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 KANSL1Q7Z3B3 1105 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 TMCO2Q7Z6W1 182 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-203ENST00000547825 GDPD1Q8N9F7 314 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 NLGN4YQ8NFZ3 816 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-203ENST00000547825 OR4K5Q8NGD3 323 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 MED30Q96HR3 178 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 SLC35G5Q96KT7 338 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 PSKH2Q96QS6 385 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 OR4K3Q96R72 315 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF300Q96RE9 604 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-203ENST00000547825 JMJD8Q96S16 334 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 RIOK2Q9BVS4 552 aaKnown RBP5.15□□□□□ -1.59
LIMA1-203ENST00000547825 FAIM2Q9BWQ8 316 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 SLIRPQ9GZT3 109 aaKnown RBP5.15□□□□□ -1.59
LIMA1-203ENST00000547825 OR2AG1Q9H205 316 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 S1PR5Q9H228 398 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 RANBP3Q9H6Z4 567 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM185BQ9H7F4 350 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 OR2S2Q9NQN1 319 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 COPZ2Q9P299 210 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 ATPIF1Q9UII2 106 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 FARSAQ9Y285 508 aaKnown RBP5.15□□□□□ -1.59
LIMA1-203ENST00000547825 OR10H1Q9Y4A9 318 aa5.15□□□□□ -1.59
LIMA1-203ENST00000547825 CACNA1DQ01668 2161 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 PRSS38A1L453 326 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 OR2A25A4D2G3 310 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 C2orf78A6NCI8 922 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 C5orf51A6NDU8 294 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 RIIAD1A6NNX1 92 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 PRICKLE3O43900 615 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ATG13O75143 517 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 EPOP01588 193 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 F13BP05160 661 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 IL3P08700 152 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 GRPRP30550 384 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 WASP42768 502 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MTNR1AP48039 350 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 KIAA1024LP59773 190 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SKP1P63208 163 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 TGM3Q08188 693 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 RGNQ15493 299 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 TBCEQ15813 527 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 C3orf36Q3SXR2 165 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MPPE1Q53F39 396 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ESCO2Q56NI9 601 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 BEX5Q5H9J7 111 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF311Q5JNZ3 666 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SCD5Q86SK9 330 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 FAM129CQ86XR2 697 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 CNTN4Q8IWV2 1026 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 UBQLNLQ8IYU4 475 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SPAG16Q8N0X2 631 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 OR4F15Q8NGB8 312 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 HUS1BQ8NHY5 278 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 DNAJA4Q8WW22 397 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 UBE2E3Q969T4 207 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 CRB3Q9BUF7 120 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 LMAN2LQ9H0V9 348 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MAGIXQ9H6Y5 334 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 METTL17Q9H7H0 456 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 DMRT3Q9NQL9 472 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM248Q9NWD8 314 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MARCH5Q9NX47 278 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZSCAN32Q9NX65 697 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 STOX2Q9P2F5 926 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 PSORS1C1Q9UIG5 152 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 HSPE1-MOB4S4R3N1 261 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 RTTNQ86VV8 2226 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SPTBP11277 2137 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 PAHP00439 452 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 GASTP01350 101 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MT-ND4P03905 459 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 DBIP07108 87 aaKnown RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 C8GP07360 202 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 PEPDP12955 493 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 FOSL2P15408 326 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ARSBP15848 533 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 RAB3BP20337 219 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 CHMP24386 653 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 HNF1BP35680 557 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SELENOWP63302 87 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ID2Q02363 134 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MICAQ29983 383 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 LYPLAL1Q5VWZ2 237 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF787Q6DD87 383 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SLC27A4Q6P1M0 643 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SLC24A5Q71RS6 500 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SLC38A6Q8IZM9 456 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 CMTM8Q8IZV2 173 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 OR8K5Q8NH50 307 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZCCHC10Q8TBK6 192 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 AUTS2Q8WXX7 1259 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 KLK6Q92876 244 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 FKBP10Q96AY3 582 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 THAP7Q9BT49 309 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 OR51J1Q9H342 316 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 DUSP21Q9H596 190 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 C7orf69Q9H7B7 122 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SLC25A37Q9NYZ2 338 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms