RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 VPS26BQ4G0F5 336 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 CCNJQ5T5M9 372 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 ZCCHC23Q6ZST2 131 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 C22orf34Q6ZV56 151 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 CAMKMTQ7Z624 323 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 METTL25Q8N6Q8 603 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 ZNF610Q8N9Z0 462 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 ZFP28Q8NHY6 868 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 AGR3Q8TD06 166 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 TCP10LQ8TDR4 215 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 SMPDL3BQ92485 455 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 MS4A4EQ96PG1 132 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
CPSF6-204ENST00000547486 SIRT3Q9NTG7 399 aaPredicted RBP12□□□□□ -0.49
CPSF6-204ENST00000547486 C6orf203Q9P0P8 240 aaPredicted RBP12□□□□□ -0.49
CPSF6-204ENST00000547486 LGALS13Q9UHV8 139 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 ATP6V1HQ9UI12 483 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 EDARQ9UNE0 448 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 TESMINQ9Y4I5 508 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 MTORP42345 2549 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 NF1P21359 2839 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 PCNX3Q9H6A9 2034 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 MED12LQ86YW9 2145 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 CASKO14936 926 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 EMC8O43402 210 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 NDUFB5O43674 189 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 GOSR1O95249 250 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 SLU7O95391 586 aaKnown RBP11.99□□□□□ -0.49
CPSF6-204ENST00000547486 NGFRP08138 427 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 ALOX5P09917 674 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 NUDT17P0C025 328 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 LAMP1P11279 417 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 CD53P19397 219 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 PSMA4P25789 261 aaKnown RBP11.99□□□□□ -0.49
CPSF6-204ENST00000547486 CD79BP40259 229 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 KEAP1Q14145 624 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 MLC1Q15049 377 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.99□□□□□ -0.49
CPSF6-204ENST00000547486 XKR7Q5GH72 579 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 SZRD1Q7Z422 152 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 OR6Y1Q8NGX8 325 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 MTERF3Q96E29 417 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 FAM120BQ96EK7 910 aaKnown RBP11.99□□□□□ -0.49
CPSF6-204ENST00000547486 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 KLHL28Q9NXS3 571 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 NDRG3Q9UGV2 375 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 ZDHHC2Q9UIJ5 367 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 ZNF175Q9Y473 711 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 C2CD3Q4AC94 2353 aa11.99□□□□□ -0.49
CPSF6-204ENST00000547486 A0A1W2PRB8 838 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 DEFB108AA8MXU0 73 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 EIF1AYO14602 144 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 SCAMP2O15127 329 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 CTIFO43310 598 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 HMGN2P05204 90 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 CCKARP32238 428 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 UGT2B10P36537 528 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 ASMTP46597 345 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 PCYT1AP49585 367 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 PPP2R2AP63151 447 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 OCRLQ01968 901 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 PTGR1Q14914 329 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 CD226Q15762 336 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 SGCBQ16585 318 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 CTU2Q2VPK5 515 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 ZCCHC12Q6PEW1 402 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 LRIG3Q6UXM1 1119 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 R3HCC1LQ7Z5L2 792 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 KRTCAP2Q8N6L1 136 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 WFDC11Q8NEX6 87 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 POC1BQ8TC44 478 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 CDS1Q92903 461 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 SH3YL1Q96HL8 342 aaPredicted RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 PPP3R2Q96LZ3 170 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 C1orf50Q9BV19 199 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 GSX1Q9H4S2 264 aaPredicted RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 EML4Q9HC35 981 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 UBQLN4Q9NRR5 601 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 ZCCHC3Q9NUD5 404 aaKnown RBP11.98□□□□□ -0.49
CPSF6-204ENST00000547486 MED17Q9NVC6 651 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 ELOVL5Q9NYP7 299 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 KCNE3Q9Y6H6 103 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 ABCA4P78363 2273 aa11.98□□□□□ -0.49
CPSF6-204ENST00000547486 VPS13CQ709C8 3753 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 A0A087WZY1 265 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 OIP5O43482 229 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 BPGMP07738 259 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 CD8BP10966 210 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 POU2F1P14859 743 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 IL11P20809 199 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 HOXC12P31275 282 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 EIF1AXP47813 144 aaKnown RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 RNF144AP50876 292 aaPredicted RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 LASP1Q14847 261 aaKnown RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 PLPPR5Q32ZL2 321 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 C6orf136Q5SQH8 315 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 CPTPQ5TA50 214 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 IL23RQ5VWK5 629 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 ANKRD34AQ69YU3 496 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms