RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TWSG1Q9GZX9 223 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PILRBQ9UKJ0 227 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF232Q9UNY5 417 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 hCG_2014768A0A024R1R8 64 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 LOC100506127A0A0U1RQW1 187 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 FAM86C2PA6NEL3 165 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 LILRA5A6NI73 299 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 DUXAA6NLW8 204 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 C4orf47A7E2U8 309 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PLOD3O60568 738 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 CTNSO60931 367 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PTHP01270 115 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 TP53P04637 393 aaPredicted RBP11.07□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF136P52737 540 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 HMGA2P52926 109 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 NCS1P62166 190 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 AQP6Q13520 282 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 GRM7Q14831 915 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 MED22Q15528 200 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 ARHGAP11BQ3KRB8 267 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 HEPHL1Q6MZM0 1159 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 UBALD2Q8IYN6 164 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 LRRC17Q8N6Y2 441 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 BBS1Q8NFJ9 593 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 RHOXF1Q8NHV9 184 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 CTHRC1Q96CG8 243 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 NRBF2Q96F24 287 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 NXF5Q9H1B4 397 aaKnown RBP11.07□□□□□ -0.64
CCDC38-202ENST00000546386 BCL2L10Q9HD36 194 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 C8orf4Q9NR00 106 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 SCN3BQ9NY72 215 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PTGFRNQ9P2B2 879 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 FTSJ1Q9UET6 329 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 LY6G6EA0A0G2JKS1 128 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 IMPA2O14732 288 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 OIP5O43482 229 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 RGS10O43665 173 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 ALOX12BO75342 701 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 NSA2O95478 260 aaKnown RBP11.06□□□□□ -0.64
CCDC38-202ENST00000546386 SLC9A3P48764 834 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 TUBA4AP68366 448 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 EPS8Q12929 822 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 KEAP1Q14145 624 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 LARS2Q15031 903 aaKnown RBP11.06□□□□□ -0.64
CCDC38-202ENST00000546386 SNAPC1Q16533 368 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 NDUFA9Q16795 377 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 RBM48Q5RL73 367 aaKnown RBP11.06□□□□□ -0.64
CCDC38-202ENST00000546386 APOOLQ6UXV4 268 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 MED25Q71SY5 747 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 STX19Q8N4C7 294 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 CDRT4Q8N9R6 151 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 SETD9Q8NE22 299 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 NDNFQ8TB73 568 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 THAP11Q96EK4 314 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 RDH12Q96NR8 316 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 DEPDC7Q96QD5 511 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 PINK1Q9BXM7 581 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 GABARAPL3Q9BY60 117 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 MARCH7Q9H992 704 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 ZBTB20Q9HC78 741 aaPredicted RBP11.06□□□□□ -0.64
CCDC38-202ENST00000546386 R4GN57 208 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 U3KQA8 63 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 GYPBP06028 91 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 EPHA8P29322 1005 aaPredicted RBP11.06□□□□□ -0.64
CCDC38-202ENST00000546386 LIPAP38571 399 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 GSTM5P46439 218 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 SLC16A1P53985 500 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 DAB2P98082 770 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 OR1Q1Q15612 314 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 PROX2Q3B8N5 592 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 APLFQ8IW19 511 aaPredicted RBP11.06□□□□□ -0.64
CCDC38-202ENST00000546386 RBM12BQ8IXT5 1001 aaKnown RBP11.06□□□□□ -0.64
CCDC38-202ENST00000546386 CYB561A3Q8NBI2 242 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 OR51L1Q8NGJ5 315 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 SAP25Q8TEE9 199 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 RORBQ92753 470 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 DIO2Q92813 273 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 TMEM203Q969S6 136 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 TP53INP1Q96A56 240 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 LRR1Q96L50 414 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 PRRC1Q96M27 445 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 TBX5Q99593 518 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 SPATA5L1Q9BVQ7 753 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 ZSCAN32Q9NX65 697 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 KLHL28Q9NXS3 571 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 FBXL4Q9UKA2 621 aa11.06□□□□□ -0.64
CCDC38-202ENST00000546386 NGFRP08138 427 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 SAGP10523 405 aaPredicted RBP11.05□□□□□ -0.64
CCDC38-202ENST00000546386 CCL4P13236 92 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 OSMP13725 252 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 MAKP20794 623 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 GPR3P46089 330 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ANXA11P50995 505 aaKnown RBP11.05□□□□□ -0.64
CCDC38-202ENST00000546386 EEF1A1P68104 462 aaKnown RBP11.05□□□□□ -0.64
CCDC38-202ENST00000546386 CASP12Q6UXS9 341 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF619Q8N2I2 560 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 TMCO5AQ8N6Q1 288 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ZFP41Q8N8Y5 198 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 OR13F1Q8NGS4 319 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 MIPOL1Q8TD10 442 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms