RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PPP6CO00743 305 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 PGM3O95394 542 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 UTS2O95399 124 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 NGFRP08138 427 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 IL3P08700 152 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 RPS17P08708 135 aaKnown RBP13.05□□□□□ -0.32
RTN3-214ENST00000545432 PYGBP11216 843 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 HSD3B1P14060 373 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 SRD5A1P18405 259 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 IL32P24001 234 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 HSD3B2P26439 372 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 TTKP33981 857 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 NUDT6P53370 316 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 CSTF3Q12996 717 aaKnown RBP13.05□□□□□ -0.32
RTN3-214ENST00000545432 RNPS1Q15287 305 aaKnown RBP13.05□□□□□ -0.32
RTN3-214ENST00000545432 ZNF239Q16600 458 aaKnown RBP13.05□□□□□ -0.32
RTN3-214ENST00000545432 LETMD1Q6P1Q0 360 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 TRABD2AQ86V40 505 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 FAM9CQ8IZT9 166 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 OR2L13Q8N349 312 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 POC1BQ8TC44 478 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 C10orf105Q8TEF2 133 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 SELENOMQ8WWX9 145 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 KISS1RQ969F8 398 aaPredicted RBP13.05□□□□□ -0.32
RTN3-214ENST00000545432 C12orf49Q9H741 205 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 Q9N2J8 555 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 CBLN4Q9NTU7 201 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 CPSF2Q9P2I0 782 aaKnown RBP13.05□□□□□ -0.32
RTN3-214ENST00000545432 KLHL13Q9P2N7 655 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 MRTO4Q9UKD2 239 aaKnown RBP13.05□□□□□ -0.32
RTN3-214ENST00000545432 UQCRHLA0A096LP55 91 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 A0A096LPK6 155 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 VWC2LB2RUY7 222 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 H7C417 338 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 UPK1AO00322 258 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 ADAP00813 363 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 IGKV1D-16P01601 117 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 PSMD4P55036 377 aaKnown RBP13.04□□□□□ -0.32
RTN3-214ENST00000545432 MANFP55145 182 aaKnown RBP13.04□□□□□ -0.32
RTN3-214ENST00000545432 CARD18P57730 90 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 C21orf58P58505 322 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 SRSF2Q01130 221 aaKnown RBP13.04□□□□□ -0.32
RTN3-214ENST00000545432 HEPACAMQ14CZ8 416 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 SGO1Q5FBB7 561 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 PDSS1Q5T2R2 415 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 HBMQ6B0K9 141 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 KLC3Q6P597 504 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 Q6ZSR9 355 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 Q6ZT83 130 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 TUSC5Q8IXB3 177 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 PLD6Q8N2A8 252 aaKnown RBP13.04□□□□□ -0.32
RTN3-214ENST00000545432 FBF1Q8TES7 1133 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 ZNF483Q8TF39 744 aaPredicted RBP13.04□□□□□ -0.32
RTN3-214ENST00000545432 EXOSC8Q96B26 276 aaKnown RBP13.04□□□□□ -0.32
RTN3-214ENST00000545432 PHF21BQ96EK2 531 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 CACNG6Q9BXT2 260 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 ING1Q9UK53 422 aaPredicted RBP13.04□□□□□ -0.32
RTN3-214ENST00000545432 SNX6Q9UNH7 406 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 VDAC3Q9Y277 283 aa13.04□□□□□ -0.32
RTN3-214ENST00000545432 A0A1W2PRB8 838 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 E7EQL1 145 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 TNFSF11O14788 317 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 NTN1O95631 604 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 OTCP00480 354 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 YES1P07947 543 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 RBP1P09455 135 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 USF1P22415 310 aaPredicted RBP13.03□□□□□ -0.32
RTN3-214ENST00000545432 GSTM5P46439 218 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 GZMKP49863 264 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 PLPPR5Q32ZL2 321 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 GRAMD1BQ3KR37 738 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 TMEM201Q5SNT2 666 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 MROH9Q5TGP6 573 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 ALKBH2Q6NS38 261 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 BHLHA15Q7RTS1 189 aaPredicted RBP13.03□□□□□ -0.32
RTN3-214ENST00000545432 P2RY8Q86VZ1 359 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.03□□□□□ -0.32
RTN3-214ENST00000545432 FAM110BQ8TC76 370 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 C16orf78Q8WTQ4 265 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 ABHD3Q8WU67 409 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 KLHL15Q96M94 604 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 ERP44Q9BS26 406 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 TBL1XR1Q9BZK7 514 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 GIMAP4Q9NUV9 329 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 MED17Q9NVC6 651 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
RTN3-214ENST00000545432 SLC35F4A4IF30 521 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 EFNA2O43921 213 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 CHN1P15882 459 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 ZNF16P17020 682 aaPredicted RBP13.02□□□□□ -0.33
RTN3-214ENST00000545432 STX2P32856 288 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 ARL1P40616 181 aaPredicted RBP13.02□□□□□ -0.33
RTN3-214ENST00000545432 MAGEA12P43365 314 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 CDH11P55287 796 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms