RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 SH3BGRLO75368 114 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 OR5F1O95221 314 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 OR10A3P58181 314 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 TAS2R50P59544 299 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 CNTN1Q12860 1018 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 NAE1Q13564 534 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 PRSS53Q2L4Q9 553 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 HENMT1Q5T8I9 393 aaKnown RBP17.08■□□□□ 0.33
CCT4-204ENST00000544079 ZNF660Q6AZW8 331 aaPredicted RBP17.08■□□□□ 0.33
CCT4-204ENST00000544079 APCDD1Q8J025 514 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 ASB13Q8WXK3 278 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 THAP4Q8WY91 577 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 OSTF1Q92882 214 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 WDR34Q96EX3 536 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 CA10Q9NS85 328 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 NKIRAS2Q9NYR9 191 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 CFAP97Q9P2B7 532 aa17.08■□□□□ 0.33
CCT4-204ENST00000544079 STOX2Q9P2F5 926 aaPredicted RBP17.08■□□□□ 0.33
CCT4-204ENST00000544079 PCDHGA9Q9Y5G4 932 aaKnown RBP17.08■□□□□ 0.33
CCT4-204ENST00000544079 TRAV1-2A0A0B4J238 106 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 A0A1B0GTQ1 180 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 NFKBIEO00221 500 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 TBX19O60806 448 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 PRAMEF2O60811 474 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 KLHL18O94889 574 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 KDM4BO94953 1096 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 CAPZA2P47755 286 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 CSNK1DP48730 415 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 TAS2R43P59537 309 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 IRF5Q13568 498 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 OR5M10Q6IEU7 315 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 TNFAIP8L2Q6P589 184 aaPredicted RBP17.08■□□□□ 0.32
CCT4-204ENST00000544079 SLCO4C1Q6ZQN7 724 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 TECPR1Q7Z6L1 1165 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 ACBD7Q8N6N7 88 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 DMRTA2Q96SC8 542 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 WFDC6Q9BQY6 131 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 SEC22CQ9BRL7 303 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 SLC6A16Q9GZN6 736 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 SLAMF7Q9NQ25 335 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 INPP5EQ9NRR6 644 aa17.08■□□□□ 0.32
CCT4-204ENST00000544079 B4GALT3O60512 393 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 STX11O75558 287 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 RAB3BP20337 219 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 E2F1Q01094 437 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 DEFA5Q01523 94 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 MC2RQ01718 297 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 ZDHHC20Q5W0Z9 365 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 OLFML2AQ68BL7 652 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 OR1M1Q8NGA1 313 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 PLD4Q96BZ4 506 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 TCEAL4Q96EI5 215 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 ARL6Q9H0F7 186 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 DMRT3Q9NQL9 472 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 TAAR2Q9P1P5 351 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 SIRT4Q9Y6E7 314 aaPredicted RBP17.07■□□□□ 0.32
CCT4-204ENST00000544079 SYN3O14994 580 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 REM1O75628 298 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 RB1P06400 928 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 ATP5C1P36542 298 aaKnown RBP17.07■□□□□ 0.32
CCT4-204ENST00000544079 ATP6V1E1P36543 226 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 SGSHP51688 502 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 DLX5P56178 289 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 SLC25A35Q3KQZ1 300 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 GID4Q8IVV7 300 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 GJD3Q8N144 294 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 SLC44A3Q8N4M1 653 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 OR5W2Q8NH69 310 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 ECHDC3Q96DC8 303 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 CAMK1GQ96NX5 476 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCT4-204ENST00000544079 BRD9Q9H8M2 597 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 NEUROD4Q9HD90 331 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 NTMQ9P121 344 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 FLVCR2Q9UPI3 526 aa17.07■□□□□ 0.32
CCT4-204ENST00000544079 FCF1Q9Y324 198 aaKnown RBP17.07■□□□□ 0.32
CCT4-204ENST00000544079 NINQ8N4C6 2090 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 KIF26AQ9ULI4 1882 aaPredicted RBP17.06■□□□□ 0.32
CCT4-204ENST00000544079 CKAP5Q14008 2032 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 HMGN4O00479 90 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 SLCO2B1O94956 709 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 CRHR2Q13324 411 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 UQCC3Q6UW78 93 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 ZNF600Q6ZNG1 722 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 CEACAM19Q7Z692 300 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 ABHD4Q8TB40 342 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 SETD7Q8WTS6 366 aaKnown RBP17.06■□□□□ 0.32
CCT4-204ENST00000544079 THEM6Q8WUY1 208 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 TREX2Q9BQ50 279 aaPredicted RBP17.06■□□□□ 0.32
CCT4-204ENST00000544079 GSDMCQ9BYG8 508 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 SEMA4CQ9C0C4 833 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 OR10A4Q9H209 315 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 DDX31Q9H8H2 851 aaKnown RBP17.06■□□□□ 0.32
CCT4-204ENST00000544079 ISG20L2Q9H9L3 353 aaKnown RBP17.06■□□□□ 0.32
CCT4-204ENST00000544079 MIEF1Q9NQG6 463 aa17.06■□□□□ 0.32
CCT4-204ENST00000544079 H2AFY2Q9P0M6 372 aaPredicted RBP17.06■□□□□ 0.32
CCT4-204ENST00000544079 GPN3Q9UHW5 284 aaPredicted RBP17.06■□□□□ 0.32
CCT4-204ENST00000544079 TMEM189-UBE2V1I3L0A0 370 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms