RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ARNTLO00327 626 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 AKR1C4P17516 323 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CST5P28325 142 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 GRPRP30550 384 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 FNTBP49356 437 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TAP2Q03519 686 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 FGL2Q14314 439 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 VASH1Q7L8A9 365 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MRPL21Q7Z2W9 205 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SNAPC3Q92966 411 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 RBM24Q9BX46 236 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 LINC00597Q9H2U6 94 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 HEBP1Q9NRV9 189 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 PCDHGA6Q9Y5G7 932 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CPNE6O95741 557 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 PRSS56P0CW18 603 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 FUT1P19526 365 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 AOAHP28039 575 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CXCR4P61073 352 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ERVK-16P61578 105 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 WDR5P61964 334 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SRYQ05066 204 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 DCST2Q5T1A1 773 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ATAD3CQ5T2N8 411 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 PLAG1Q6DJT9 500 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 B3GNT9Q6UX72 402 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ASRGL1Q7L266 308 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 HSD11B1LQ7Z5J1 315 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 WDR53Q7Z5U6 358 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MCATQ8IVS2 390 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 GCDHQ92947 438 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF300Q96RE9 604 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SULT4A1Q9BR01 284 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 LHPPQ9H008 270 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SACM1LQ9NTJ5 587 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MCTS1Q9ULC4 181 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 NUBP2Q9Y5Y2 271 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TTC3P53804 2025 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TNFRSF1BP20333 461 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CD6P30203 668 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TAS2R31P59538 309 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 RAB31Q13636 194 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CNN3Q15417 329 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 DUS1LQ6P1R4 473 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF765Q7L2R6 523 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TRAPPC6BQ86SZ2 158 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM151AQ8N4L1 468 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 OR9Q2Q8NGE9 314 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 NAT6Q93015 286 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 HCAR1Q9BXC0 346 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CNOT2Q9NZN8 540 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 REV1Q9UBZ9 1251 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TOGARAM1Q9Y4F4 1720 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SEC14L5O43304 696 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ZFAND5O76080 213 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ICAM2P13598 275 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 PBX2P40425 430 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ALDH3B2P48448 385 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 WNT7BP56706 349 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 PAGE3Q5JUK9 113 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 LYSMD4Q5XG99 296 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 GPR149Q86SP6 731 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SGPP2Q8IWX5 399 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CMTM1Q8IZ96 169 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 GPR26Q8NDV2 337 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MDGA1Q8NFP4 955 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 OR7D2Q96RA2 312 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF587Q96SQ5 575 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 C1QTNF2Q9BXJ5 285 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CLMPQ9H6B4 373 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CPNE7Q9UBL6 633 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MROH6A6NGR9 719 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MT-CO2P00403 227 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 LCATP04180 440 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CA3P07451 260 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 NTHL1P78549 312 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MRPS10P82664 201 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 NFATC3Q12968 1075 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ATXN7L3Q14CW9 347 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 IRF4Q15306 451 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 GARNL3Q5VVW2 1013 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 HACD4Q5VWC8 232 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 FAM83HQ6ZRV2 1179 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 NLGN4XQ8N0W4 816 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TCTN2Q96GX1 697 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ACPTQ9BZG2 426 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 DPH1Q9BZG8 443 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 RNF38Q9H0F5 515 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TP63Q9H3D4 680 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 A8MV72 311 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SGK494L7N484 410 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 IGHEP01854 428 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 SDC1P18827 310 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 RAB3AP20336 220 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MAGEA3P43357 314 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 C6orf132Q5T0Z8 1188 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF691Q5VV52 312 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CCDC28AQ8IWP9 274 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CNOT9Q92600 299 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 RADILQ96JH8 1075 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms