RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 IL18BPO95998 194 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 ALOX5P09917 674 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 PEPDP12955 493 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 DDX5P17844 614 aaKnown RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 PRPS1L1P21108 318 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 CPA2P48052 419 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 RPL14P50914 215 aaKnown RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 SLC18A1P54219 525 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 CLDN15P56746 228 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 CLDN8P56748 225 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 PRR5P85299 388 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 BST1Q10588 318 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 MAD2L1Q13257 205 aaPredicted RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 LASP1Q14847 261 aaKnown RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 CPTPQ5TA50 214 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 ZCCHC12Q6PEW1 402 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 NATD1Q8N6N6 113 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 OR4C3Q8NH37 302 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 LINC01560Q8TB33 94 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 OR5P2Q8WZ92 322 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 UCN2Q96RP3 112 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 RBM24Q9BX46 236 aaKnown RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 BHLHE41Q9C0J9 482 aaPredicted RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 CXorf36Q9H7Y0 433 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 NOP53Q9NZM5 478 aaKnown RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 JKAMPQ9P055 326 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 FOXD3Q9UJU5 478 aaPredicted RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 EIF3LQ9Y262 564 aaKnown RBP13.51□□□□□ -0.25
RAB40B-202ENST00000538809 VDAC3Q9Y277 283 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 ZNF337Q9Y3M9 751 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 HIVEP1P15822 2718 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
RAB40B-202ENST00000538809 TMEM120BA0PK00 339 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 SLC22A20A6NK97 555 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 A6NNC1 897 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 ANKRD28O15084 1053 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 ERLIN1O75477 346 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 C6orf47O95873 294 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 HMGN2P05204 90 aaKnown RBP13.5□□□□□ -0.25
RAB40B-202ENST00000538809 NGFRP08138 427 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 DNAJA1P31689 397 aaKnown RBP13.5□□□□□ -0.25
RAB40B-202ENST00000538809 PEX19P40855 299 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 PRIM2P49643 509 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 SUCLG1P53597 346 aaKnown RBP13.5□□□□□ -0.25
RAB40B-202ENST00000538809 DIO3P55073 304 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 CLDN20P56880 219 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 C17orf67Q0P5P2 114 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 STX3Q13277 289 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 TP53BP2Q13625 1128 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 TESK1Q15569 626 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 BCL2A1Q16548 175 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAB40B-202ENST00000538809 CHMP1BQ7LBR1 199 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 LRRC34Q8IZ02 419 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 KIRREL3Q8IZU9 778 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 MEIOBQ8N635 442 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 FAM222BQ8WU58 562 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 FIG4Q92562 907 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 CDS1Q92903 461 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 NPAS1Q99742 590 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 KLHDC3Q9BQ90 382 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 PIGQQ9BRB3 760 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 PINK1Q9BXM7 581 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 CLEC4MQ9H2X3 399 aaPredicted RBP13.5□□□□□ -0.25
RAB40B-202ENST00000538809 TMBIM4Q9HC24 238 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 ATAD3AQ9NVI7 634 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 PNPOQ9NVS9 261 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 GPATCH2Q9NW75 528 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 GIN1Q9NXP7 522 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 GALNT8Q9NY28 637 aa13.5□□□□□ -0.25
RAB40B-202ENST00000538809 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 NPIPA5A0A0B4J1W7 369 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 A0A1W2PNV4 684 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 TUBAL3A6NHL2 446 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 ALG1L2C9J202 215 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 NPIPA7E9PJI5 369 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 NDUFB5O43674 189 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 SCN2BO60939 215 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 SNNO75324 88 aaPredicted RBP13.49□□□□□ -0.25
RAB40B-202ENST00000538809 TNFSF13O75888 250 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 NPIPA8P0DM63 369 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 SOAT1P35610 550 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 CPOXP36551 454 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 RNF144AP50876 292 aaPredicted RBP13.49□□□□□ -0.25
RAB40B-202ENST00000538809 SIRPAP78324 504 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 POU6F2P78424 691 aaPredicted RBP13.49□□□□□ -0.25
RAB40B-202ENST00000538809 SPDYE7PQ495Y7 208 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 VWA1Q6PCB0 445 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 KIF18BQ86Y91 864 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 CNEP1R1Q8N9A8 125 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 ANKRD42Q8N9B4 389 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 OR5AK3PQ8NH89 298 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 SFXN5Q8TD22 340 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 SH3YL1Q96HL8 342 aaPredicted RBP13.49□□□□□ -0.25
RAB40B-202ENST00000538809 ZNF845Q96IR2 970 aaPredicted RBP13.49□□□□□ -0.25
RAB40B-202ENST00000538809 STACQ99469 402 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 ACBD3Q9H3P7 528 aa13.49□□□□□ -0.25
RAB40B-202ENST00000538809 LIME1Q9H400 295 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms