RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZNF438Q7Z4V0 828 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 RANBP3LQ86VV4 465 aaPredicted RBP23.16■■□□□ 1.3
RAB40C-204ENST00000538492 PFN4Q8NHR9 129 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 PRSS27Q9BQR3 290 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 TWSG1Q9GZX9 223 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 LYRM4Q9HD34 91 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 ABCB9Q9NP78 766 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 TDRD6O60522 2096 aaKnown RBP23.16■■□□□ 1.3
RAB40C-204ENST00000538492 H3BQ06 376 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-204ENST00000538492 SLC30A4O14863 429 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 HCRTR1O43613 425 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 CT62P0C5K7 136 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 ATP6V1E1P36543 226 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 RFX3P48380 749 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 FABP5Q01469 135 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF79Q15937 498 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 SIAEQ9HAT2 523 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 CLDND1Q9NY35 253 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 TBC1D24Q9ULP9 559 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 CLCA2Q9UQC9 943 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 LRP4O75096 1905 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 IQCMA0A1B0GVH7 501 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 SOCS6O14544 535 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 ATP1B1P05026 303 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 DRD1P21728 446 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 VSX2P58304 361 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF791Q3KP31 576 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-204ENST00000538492 CPOQ8IVL8 374 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 NACC2Q96BF6 587 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 ATP13A2Q9NQ11 1180 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 HINT3Q9NQE9 182 aaKnown RBP23.15■■□□□ 1.3
RAB40C-204ENST00000538492 C20orf141Q9NUB4 165 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 PLEKHB1Q9UF11 243 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-204ENST00000538492 SPACA6W5XKT8 324 aa23.15■■□□□ 1.3
RAB40C-204ENST00000538492 CYR61O00622 381 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 APOA1P02647 267 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 THBS1P07996 1170 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 GABRG2P18507 467 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 TMED10P49755 219 aaKnown RBP23.14■■□□□ 1.3
RAB40C-204ENST00000538492 CAV3P56539 151 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 MADCAM1Q13477 382 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 KRR1Q13601 381 aaKnown RBP23.14■■□□□ 1.3
RAB40C-204ENST00000538492 BAK1Q16611 211 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 SMARCD3Q6STE5 483 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 UBQLN3Q9H347 655 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 TIGARQ9NQ88 270 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 CBLCQ9ULV8 474 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 TRAPPC4Q9Y296 219 aa23.14■■□□□ 1.3
RAB40C-204ENST00000538492 LINC00854A0A1B0GVQ3 168 aa23.14■■□□□ 1.29
RAB40C-204ENST00000538492 SGK494L7N484 410 aa23.14■■□□□ 1.29
RAB40C-204ENST00000538492 ZGLP1P0C6A0 271 aa23.14■■□□□ 1.29
RAB40C-204ENST00000538492 YPEL5P62699 121 aa23.14■■□□□ 1.29
RAB40C-204ENST00000538492 QSOX2Q6ZRP7 698 aa23.14■■□□□ 1.29
RAB40C-204ENST00000538492 ZNF485Q8NCK3 441 aa23.14■■□□□ 1.29
RAB40C-204ENST00000538492 ENKD1Q9H0I2 346 aa23.14■■□□□ 1.29
RAB40C-204ENST00000538492 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 A0A1W2PQL4 384 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 TRAPPC13A5PLN9 417 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 SYNDIG1LA6NDD5 238 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 GPR75O95800 540 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 DBIP07108 87 aaKnown RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 MRPS21P82921 87 aaKnown RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 OR1Q1Q15612 314 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 PRICKLE4Q2TBC4 344 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 CAMKK1Q8N5S9 505 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 CSNK1A1LQ8N752 337 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 SLC37A2Q8TED4 501 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 ZFPM2Q8WW38 1151 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 DCLRE1CQ96SD1 692 aaKnown RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 SECISBP2Q96T21 854 aaKnown RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 TMED9Q9BVK6 235 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 OR52D1Q9H346 318 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 MAT2BQ9NZL9 334 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 H2AFY2Q9P0M6 372 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 MN1Q10571 1320 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 SEMA4FO95754 770 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 CTSBP07858 339 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 NID1P14543 1247 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 MAKP20794 623 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 GABRA5P31644 462 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 GABRA3P34903 492 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 SLC9A3P48764 834 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 DEFB110Q30KQ9 67 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 SLC35F1Q5T1Q4 408 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 ZC3H14Q6PJT7 736 aaKnown RBP23.13■■□□□ 1.29
RAB40C-204ENST00000538492 CDRT4Q8N9R6 151 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 TXNDC15Q96J42 360 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 KATNB1Q9BVA0 655 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 MCOLN1Q9GZU1 580 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 MIXL1Q9H2W2 232 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 MED20Q9H944 212 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 TBC1D17Q9HA65 648 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 IL21RQ9HBE5 538 aa23.13■■□□□ 1.29
RAB40C-204ENST00000538492 GXYLT2A0PJZ3 443 aa23.12■■□□□ 1.29
RAB40C-204ENST00000538492 TNFP01375 233 aa23.12■■□□□ 1.29
RAB40C-204ENST00000538492 DSG2Q14126 1118 aa23.12■■□□□ 1.29
RAB40C-204ENST00000538492 NXNL2Q5VZ03 156 aa23.12■■□□□ 1.29
RAB40C-204ENST00000538492 PLBD1Q6P4A8 553 aa23.12■■□□□ 1.29
RAB40C-204ENST00000538492 AKAP14Q86UN6 197 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms