RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HOXA6P31267 233 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 ASMTP46597 345 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 HCCSP53701 268 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 WNT3AP56704 352 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 KCNAB1Q14722 419 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TMEM91Q6ZNR0 172 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 OR9Q2Q8NGE9 314 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 SELENOMQ8WWX9 145 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 UBL7Q96S82 380 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 INPP5KQ9BT40 448 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 MFFQ9GZY8 342 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TREM1Q9NP99 234 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 RLIMQ9NVW2 624 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 PTGFRNQ9P2B2 879 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 FBXW11Q9UKB1 542 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 MBTPS2O43462 519 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 LANCL1O43813 399 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 ULK1O75385 1050 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 SOD1P00441 154 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 MT-ND4P03905 459 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 FOLR2P14207 255 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 CSF2RBP32927 897 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 BTCP35070 178 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 TPBGQ13641 420 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 ABRAXAS2Q15018 415 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 GUCA2BQ16661 112 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 OR6V1Q8N148 313 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 SH3RF2Q8TEC5 729 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 CA5BP1Q8WTZ4 195 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 ESAMQ96AP7 390 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF689Q96CS4 500 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 AARSD1Q9BTE6 412 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 TMED9Q9BVK6 235 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 POLDIP3Q9BY77 421 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 TOLLIPQ9H0E2 274 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 SLC25A19Q9HC21 320 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 NLGN3Q9NZ94 848 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 NUDT4Q9NZJ9 180 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 YARS2Q9Y2Z4 477 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 EXOSC1Q9Y3B2 195 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 CHST2Q9Y4C5 530 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 TMEM200CA6NKL6 621 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 KLHL18O94889 574 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 CPSF4O95639 269 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 GJA1P17302 382 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 RAB8AP61006 207 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 KIAA1161Q6NSJ0 714 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 C11orf88Q6PI97 169 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 MSANTD1Q6ZTZ1 278 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 TAC4Q86UU9 113 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 NAGSQ8N159 534 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF687Q8N1G0 1237 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 POMGNT2Q8NAT1 580 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 OR52B6Q8NGF0 335 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 GNPDA2Q8TDQ7 276 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 PIGKQ92643 395 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 ORAI1Q96D31 301 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 ZFP3Q96NJ6 502 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 PAAF1Q9BRP4 392 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 IRAK3Q9Y616 596 aa10.21□□□□□ -0.77
CLSTN3-207ENST00000537408 HEPACAM2A8MVW5 462 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 MAGEB17A8MXT2 336 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 SBK2P0C263 348 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 ACPPP15309 386 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 PPIBP23284 216 aaKnown RBP10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 DLX5P56178 289 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 BIKQ13323 160 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 ZNF660Q6AZW8 331 aaPredicted RBP10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 OR5M10Q6IEU7 315 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 PAQR3Q6TCH7 311 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 BAIAP2L2Q6UXY1 529 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 NTAN1Q96AB6 310 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 OR10H1Q9Y4A9 318 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 PLEKHM1Q9Y4G2 1056 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 MAP1BP46821 2468 aaKnown RBP10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 FAM221BA6H8Z2 402 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 BTBD17A6NE02 478 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 SOX1O00570 391 aaPredicted RBP10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 PGRMC2O15173 223 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 AKR7A3O95154 331 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 HEXAP06865 529 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 CD3GP09693 182 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 PRPS2P11908 318 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 AQP1P29972 269 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 MNDAP41218 407 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 KIR3DL1P43629 444 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 PPT1P50897 306 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 NPWQ8N729 165 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 OR6K3Q8NGY3 331 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 OTUB2Q96DC9 234 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 C7orf34Q96L11 122 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 OR10A4Q9H209 315 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 PIAS3Q9Y6X2 628 aa10.21□□□□□ -0.78
CLSTN3-207ENST00000537408 ZNF236Q9UL36 1845 aa10.2□□□□□ -0.78
CLSTN3-207ENST00000537408 FAM86C2PA6NEL3 165 aa10.2□□□□□ -0.78
CLSTN3-207ENST00000537408 GABRR3A8MPY1 467 aa10.2□□□□□ -0.78
CLSTN3-207ENST00000537408 REM1O75628 298 aa10.2□□□□□ -0.78
CLSTN3-207ENST00000537408 HPXP02790 462 aa10.2□□□□□ -0.78
CLSTN3-207ENST00000537408 CHI3L1P36222 383 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms