RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HIF3AQ9Y2N7 669 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 A0A0D9SG52 128 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 J3KTA2 159 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 GKN3PP0CG01 181 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF10P21506 573 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MTNR1BP49286 362 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SRP9P49458 86 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ST3GAL3Q11203 375 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 GBX1Q14549 363 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 CHRNA6Q15825 494 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 GFOD2Q3B7J2 385 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NHLRC3Q5JS37 347 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 TRNP1Q6NT89 227 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NLRC3Q7RTR2 1065 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 YAF2Q8IY57 180 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NANOGP1Q8N7R0 232 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SPRYD4Q8WW59 207 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 UBE2FQ969M7 185 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SMOQ99835 787 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 WDR26Q9H7D7 661 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 DPP7Q9UHL4 492 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 XKRYO14609 159 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SCAMP2O15127 329 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 C8orf89P0DMQ9 161 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 OR3A2P47893 321 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MTNR1AP48039 350 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 RAB5CP51148 216 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 VLDLRP98155 873 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MPPED2Q15777 294 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 Q5BKY6 102 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 FAM219BQ5XKK7 198 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NUDT18Q6ZVK8 323 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 COMTD1Q86VU5 262 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF563Q8TA94 476 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 THRSPQ92748 146 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 RGMAQ96B86 450 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZBED6CLQ96FA7 236 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ABHD16BQ9H3Z7 469 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 C11orf49Q9H6J7 331 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 RDH14Q9HBH5 336 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 PPP4R1LQ9P1A2 415 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 IGKV6-21A0A0C4DH24 114 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ASPDHA6ND91 283 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NEDD8-MDP1E9PL57 170 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 GTPBP1O00178 669 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 CSO75390 466 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MTHFD2P13995 350 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 AKR1C4P17516 323 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 DDX6P26196 483 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 CCR6P51684 374 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 HMGA2P52926 109 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 PEA15Q15121 130 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ELFN2Q5R3F8 820 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 GPRIN1Q7Z2K8 1008 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 WDR53Q7Z5U6 358 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MS4A15Q8N5U1 240 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 OR5M3Q8NGP4 307 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NUDT8Q8WV74 236 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NSMAFQ92636 917 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 IMP4Q96G21 291 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 TUBB1Q9H4B7 451 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 INPP5EQ9NRR6 644 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 EVA1BQ9NVM1 165 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 BTNL2Q9UIR0 455 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 RCE1Q9Y256 329 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SLC27A6Q9Y2P4 619 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 LY75O60449 1722 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 TRAV20A0A0B4J274 112 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SERTM1A2A2V5 107 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 UNC119BA6NIH7 251 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 KIAA0355O15063 1070 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 PQBP1O60828 265 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 UBXN7O94888 489 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SFTPBP07988 381 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ALPPL2P10696 532 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 RFC3P40938 356 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MRPS6P82932 125 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 PCGF3Q3KNV8 242 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ABCA11PQ4W5N1 156 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 KANSL1Q7Z3B3 1105 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 TMPRSS12Q86WS5 348 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 LNX2Q8N448 690 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 C3orf49Q96BT1 292 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ELP4Q96EB1 424 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 OCSTAMPQ9BR26 566 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NTMT1Q9BV86 223 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MED17Q9NVC6 651 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ABRACLQ9P1F3 81 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF223Q9UK11 482 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 UTS2RQ9UKP6 389 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 RASD1Q9Y272 281 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 PCDHGA2Q9Y5H1 932 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 MEIS3P1A6NDR6 274 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF705GA8MUZ8 300 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 SMAD6O43541 496 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 USP2O75604 605 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF250P15622 560 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 PAX6P26367 422 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 NKX6-1P78426 367 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZDHHC20Q5W0Z9 365 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms