RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 C5orf34Q96MH7 638 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 LPAR4Q99677 370 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 PIMREGQ9BSJ6 248 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 TRIM45Q9H8W5 580 aaPredicted RBP8.61□□□□□ -1.03
UBB-204ENST00000535788 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.61□□□□□ -1.03
UBB-204ENST00000535788 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.61□□□□□ -1.03
UBB-204ENST00000535788 XPR1Q9UBH6 696 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 HIF3AQ9Y2N7 669 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 MRPS7Q9Y2R9 242 aaKnown RBP8.61□□□□□ -1.03
UBB-204ENST00000535788 STRAPQ9Y3F4 350 aaKnown RBP8.61□□□□□ -1.03
UBB-204ENST00000535788 HIVEP1P15822 2718 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 CPAMD8Q8IZJ3 1885 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 PDZD2O15018 2839 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 APCP25054 2843 aa8.61□□□□□ -1.03
UBB-204ENST00000535788 SMIM30A4D0T7 59 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 SLC33A1O00400 549 aaPredicted RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 SSX5O60225 188 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 SIX3O95343 332 aaPredicted RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 TGM6O95932 706 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 F10P00742 488 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 SNRPAP09012 282 aaKnown RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 MAOAP21397 527 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 ZNF10P21506 573 aaPredicted RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 CERS1P27544 350 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 SLC15A1P46059 708 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 MTNR1BP49286 362 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 MTTPP55157 894 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 RAB38P57729 211 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 BTG2P78543 158 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 TGM3Q08188 693 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 RUNX2Q13950 521 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 EXT1Q16394 746 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 ADPRMQ3LIE5 342 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 FAM153CQ494X1 144 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 TOR2AQ5JU69 321 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 ABHD17BQ5VST6 288 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 GRHL2Q6ISB3 625 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 QSOX2Q6ZRP7 698 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 GOLGA7Q7Z5G4 137 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 NUDT13Q86X67 352 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 CYP4X1Q8N118 509 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 PTGR2Q8N8N7 351 aaPredicted RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 SCAIQ8N9R8 606 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 C11orf65Q8NCR3 313 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 CATSPER1Q8NEC5 780 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 OR6Y1Q8NGX8 325 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 CD300LFQ8TDQ1 290 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 ZNF473Q8WTR7 871 aaKnown RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 TSEN15Q8WW01 171 aaKnown RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 GLMPQ8WWB7 406 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 UBE2E3Q969T4 207 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 RASD2Q96D21 266 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 METTL2AQ96IZ6 378 aaKnown RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 PTCHD1Q96NR3 888 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 QRFPRQ96P65 431 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 F2RL3Q96RI0 385 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 RBM4BQ9BQ04 359 aaKnown RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 RBM4Q9BWF3 364 aaKnown RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 NPLQ9BXD5 320 aaPredicted RBP8.6□□□□□ -1.03
UBB-204ENST00000535788 MS4A8Q9BY19 250 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 SLC29A3Q9BZD2 475 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 PKIBQ9C010 78 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 OR51V1Q9H2C8 321 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 ACTR8Q9H981 624 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 ASF1BQ9NVP2 202 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 PLA2G3Q9NZ20 509 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 KCNK7Q9Y2U2 307 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 AKAP9Q99996 3911 aa8.6□□□□□ -1.03
UBB-204ENST00000535788 IGKV3D-11A0A0A0MRZ8 115 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 A8MUI8 341 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 ASNA1O43681 348 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 TLX2O43763 284 aaPredicted RBP8.59□□□□□ -1.03
UBB-204ENST00000535788 SH3BGRLO75368 114 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 WBP4O75554 376 aaKnown RBP8.59□□□□□ -1.03
UBB-204ENST00000535788 ACTL6BO94805 426 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 HTR3BO95264 441 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 WDPCPO95876 746 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 CRYGCP07315 174 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 YES1P07947 543 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 RBP1P09455 135 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 TCN1P20061 433 aaPredicted RBP8.59□□□□□ -1.03
UBB-204ENST00000535788 GCAP28676 217 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 SERPINB1P30740 379 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 TSFMP43897 325 aaKnown RBP8.59□□□□□ -1.03
UBB-204ENST00000535788 PIK3CGP48736 1102 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 SELENOVP59797 346 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 ZNF33BQ06732 778 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 PCDH1Q08174 1060 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 GTF2H2Q13888 395 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.032e-8■□□□□ 9.5
UBB-204ENST00000535788 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 C6orf163Q5TEZ5 329 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 SP5Q6BEB4 398 aaPredicted RBP8.59□□□□□ -1.03
UBB-204ENST00000535788 GTF2H2CQ6P1K8 395 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 CRLF3Q8IUI8 442 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 LINC00346Q8IVM7 164 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 LAS2Q8IYD9 372 aa8.59□□□□□ -1.03
UBB-204ENST00000535788 FAM47BQ8NA70 645 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms