RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 STACQ99469 402 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 YIPF4Q9BSR8 244 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 SFXN3Q9BWM7 321 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 CXorf36Q9H7Y0 433 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 PTGES2Q9H7Z7 377 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 DUSP22Q9NRW4 184 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 ATAD3AQ9NVI7 634 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 GPATCH2Q9NW75 528 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-215ENST00000534307 ZNF337Q9Y3M9 751 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 NUP214P35658 2090 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-215ENST00000534307 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 H0YC42 278 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 LINC01387J3KSC0 135 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 TNFSF13O75888 250 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 SNUPNO95149 360 aaKnown RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 ZWINTO95229 277 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 ALOX5P09917 674 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 PEPDP12955 493 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 CD1EP15812 388 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 PRIM2P49643 509 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 SUCLG1P53597 346 aaKnown RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 TPD52P55327 224 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 CLDN8P56748 225 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 SORDQ00796 357 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 LASP1Q14847 261 aaKnown RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 CCNJQ5T5M9 372 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 RAET1LQ5VY80 246 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 ZZZ3Q8IYH5 903 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 GCNT2Q8N0V5 402 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 OR5M1Q8NGP8 315 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 GOT1L1Q8NHS2 421 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 PIGQQ9BRB3 760 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 BTBD2Q9BX70 525 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 BHLHE41Q9C0J9 482 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 PIGUQ9H490 435 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 AKTIPQ9H8T0 292 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 NEUROD4Q9HD90 331 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 NOP53Q9NZM5 478 aaKnown RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 EIF3LQ9Y262 564 aaKnown RBP12.68□□□□□ -0.38
SF3B2-215ENST00000534307 RAP2CQ9Y3L5 183 aa12.68□□□□□ -0.38
SF3B2-215ENST00000534307 C7orf72A4D263 438 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 EEF1E1-BLOC1S5C9J1V9 151 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 EEF1E1O43324 174 aaKnown RBP12.67□□□□□ -0.38
SF3B2-215ENST00000534307 C6orf47O95873 294 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 MYZAPP0CAP1 466 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 SLC1A6P48664 564 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 CCT3P49368 545 aaKnown RBP12.67□□□□□ -0.38
SF3B2-215ENST00000534307 CLDN20P56880 219 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 HBA1P69905 142 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 OCRLQ01968 901 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 MAD2L1Q13257 205 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-215ENST00000534307 LSM12Q3MHD2 195 aaKnown RBP12.67□□□□□ -0.38
SF3B2-215ENST00000534307 FLYWCH1Q4VC44 716 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 CDC73Q6P1J9 531 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 GGNQ86UU5 652 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 GRAMD2AQ8IUY3 354 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 COX18Q8N8Q8 333 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 OR56A1Q8NGH5 318 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 SFXN5Q8TD22 340 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 FAM222BQ8WU58 562 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 JADE3Q92613 823 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 CDS1Q92903 461 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 INTS12Q96CB8 462 aaKnown RBP12.67□□□□□ -0.38
SF3B2-215ENST00000534307 LRRC46Q96FV0 321 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 PRPF18Q99633 342 aaKnown RBP12.67□□□□□ -0.38
SF3B2-215ENST00000534307 KLHDC3Q9BQ90 382 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 DUSP26Q9BV47 211 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 TMUB1Q9BVT8 246 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 ACBD3Q9H3P7 528 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 UBQLN4Q9NRR5 601 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 SNX8Q9Y5X2 465 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 JMJD1CQ15652 2540 aa12.67□□□□□ -0.38
SF3B2-215ENST00000534307 A0A1W2PNV4 684 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 A0A1W2PQD3 144 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 A8MXE2 369 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 NPIPB9F8W1W9 429 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 ANKRD28O15084 1053 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 NDUFB5O43674 189 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 TNFRSF21O75509 655 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 CRHP06850 196 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 ZNF17P17021 662 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 BGNP21810 368 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 PSMA4P25789 261 aaKnown RBP12.66□□□□□ -0.38
SF3B2-215ENST00000534307 RPL14P50914 215 aaKnown RBP12.66□□□□□ -0.38
SF3B2-215ENST00000534307 POU6F2P78424 691 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-215ENST00000534307 DAZAP2Q15038 168 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-215ENST00000534307 CD226Q15762 336 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 CROCCP2Q86T23 111 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 TMEM200AQ86VY9 491 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 UBQLNLQ8IYU4 475 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 LRRC34Q8IZ02 419 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 GTPBP8Q8N3Z3 284 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-215ENST00000534307 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 METTL25Q8N6Q8 603 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 ACTRT2Q8TDY3 377 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 FIG4Q92562 907 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 ZBTB9Q96C00 473 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms