RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SAGE1Q9NXZ1 904 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 TAAR2Q9P1P5 351 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 CD300AQ9UGN4 299 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 H0YGG7 62 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 TOXO94900 526 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 SYNGR4O95473 234 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 PNMTP11086 282 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 IRS1P35568 1242 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 ART1P52961 327 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 PER3P56645 1201 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 ARF3P61204 181 aaPredicted RBP16.5■□□□□ 0.23
PHRF1-205ENST00000533464 ACY1Q03154 408 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 POGLUT1Q8NBL1 392 aa16.5■□□□□ 0.23
PHRF1-205ENST00000533464 CNOT2Q9NZN8 540 aaKnown RBP16.5■□□□□ 0.23
PHRF1-205ENST00000533464 H2AFB2P0C5Z0 115 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 ANXA3P12429 323 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 CR2P20023 1033 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 ZFP90Q8TF47 636 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 ZDHHC11BP0C7U3 371 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 SPNS2Q8IVW8 549 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 SYNPOQ8N3V7 929 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 OR13C3Q8NGS6 347 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 OR5AK2Q8NH90 309 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 GGHQ92820 318 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 ADOQ96SZ5 270 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 PHYHO14832 338 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 SEC14L5O43304 696 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 TUBB3Q13509 450 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 LRRC37A5PQ49AS3 106 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 GDPD1Q8N9F7 314 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 SPRYD4Q8WW59 207 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-205ENST00000533464 NAA50Q9GZZ1 169 aaKnown RBP16.49■□□□□ 0.23
PHRF1-205ENST00000533464 ZNF304Q9HCX3 659 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 NUMBLQ9Y6R0 609 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 PTTG1O95997 202 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 NPPBP16860 134 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 CHMP24386 653 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 PTRH1Q86Y79 214 aaKnown RBP16.49■□□□□ 0.23
PHRF1-205ENST00000533464 TIGD4Q8IY51 512 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 TMEFF1Q8IYR6 380 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 OR5W2Q8NH69 310 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 CRB3Q9BUF7 120 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 C1QTNF2Q9BXJ5 285 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 PDFQ9HBH1 243 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 RDH8Q9NYR8 311 aa16.49■□□□□ 0.23
PHRF1-205ENST00000533464 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-205ENST00000533464 M0R233 179 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 CDK4P11802 303 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 EN2P19622 333 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 DAPP51397 102 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 GRK1Q15835 563 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 HES5Q5TA89 166 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TMEM184AQ6ZMB5 413 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 SLC35F2Q8IXU6 374 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ALDH16A1Q8IZ83 802 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 SGCDQ92629 289 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 C16orf58Q96GQ5 468 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 URM1Q9BTM9 101 aaKnown RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 EPHX3Q9H6B9 360 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 MGAT4AQ9UM21 535 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TRBV4-1A0A0J9YWV2 114 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 GYPBP06028 91 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 HERV-K104P61576 105 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 MRPS21P82921 87 aaKnown RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 DEFA5Q01523 94 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 SFRP4Q6FHJ7 346 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ELP5Q8TE02 316 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 NUDT8Q8WV74 236 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ALG5Q9Y673 324 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 H3BML4 177 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 IGLV3-27P01718 113 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ERCC1P07992 297 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 SLC5A2P31639 672 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ERV3-1Q14264 604 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TBCEQ15813 527 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 MFSD9Q8NBP5 474 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TRMT10AQ8TBZ6 339 aaKnown RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 MS4A8Q9BY19 250 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ACTR6Q9GZN1 396 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 QRSL1Q9H0R6 528 aaKnown RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ZNF701Q9NV72 531 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 C2orf42Q9NWW7 574 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 UBL4AP11441 157 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 CFL1P23528 166 aaKnown RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TLE3Q04726 772 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 XKR7Q5GH72 579 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 AFMIDQ63HM1 303 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ADAMTSL4Q6UY14 1074 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 LINC01599Q8WXQ3 324 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TMEM185BQ9H7F4 350 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 CXorf36Q9H7Y0 433 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TM7SF3Q9NS93 570 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ABCD2Q9UBJ2 740 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 ZNF443Q9Y2A4 671 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-205ENST00000533464 CARD8Q9Y2G2 431 aa16.48■□□□□ 0.23
PHRF1-205ENST00000533464 TRAV27A0A087WT01 109 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 TMEM202A6NGA9 273 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 RFXAPO00287 272 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 PLATP00750 562 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms