RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ACBD3Q9H3P7 528 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 PIGUQ9H490 435 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 CXorf36Q9H7Y0 433 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 UBQLN4Q9NRR5 601 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 DUSP22Q9NRW4 184 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 GIN1Q9NXP7 522 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 ASIC5Q9NY37 505 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 ZNF337Q9Y3M9 751 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 L3MBTL1Q9Y468 752 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 IGLV3-32A0A0A0MS00 114 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 SCDO00767 359 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 OXSR1O95747 527 aaPredicted RBP15.58■□□□□ 0.08
PHRF1-204ENST00000532550 NGFRP08138 427 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 KRT16P08779 473 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 C21orf58P58505 322 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 EEF1A1P68104 462 aaKnown RBP15.58■□□□□ 0.08
PHRF1-204ENST00000532550 SNTB1Q13884 538 aaKnown RBP15.58■□□□□ 0.08
PHRF1-204ENST00000532550 FBXL19-AS1Q494R0 122 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 EEF1A1P5Q5VTE0 462 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 CDC73Q6P1J9 531 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 BHLHB9Q6PI77 547 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 P4HA3Q7Z4N8 544 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 GRAMD2AQ8IUY3 354 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 OR5M1Q8NGP8 315 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 CDS1Q92903 461 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 INTS12Q96CB8 462 aaKnown RBP15.58■□□□□ 0.08
PHRF1-204ENST00000532550 SORT1Q99523 831 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 SH3GL2Q99962 352 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 NEUROD4Q9HD90 331 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 FBXO34Q9NWN3 711 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 STOML1Q9UBI4 398 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 PDZD2O15018 2839 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 SPG11Q96JI7 2443 aa15.58■□□□□ 0.08
PHRF1-204ENST00000532550 OR2M5A3KFT3 312 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 EEF1E1-BLOC1S5C9J1V9 151 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 EEF1E1O43324 174 aaKnown RBP15.57■□□□□ 0.08
PHRF1-204ENST00000532550 ATP6V1C1P21283 382 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 BST1Q10588 318 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 FOXF2Q12947 444 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 EXOSC6Q5RKV6 272 aaKnown RBP15.57■□□□□ 0.08
PHRF1-204ENST00000532550 CCNJQ5T5M9 372 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 PLXDC2Q6UX71 529 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 TMEM200AQ86VY9 491 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 KIF18BQ86Y91 864 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 MISPQ8IVT2 679 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 ZZZ3Q8IYH5 903 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 SFXN5Q8TD22 340 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 SFXN3Q9BWM7 321 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 NUF2Q9BZD4 464 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 DPY30Q9C005 99 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 HOXD1Q9GZZ0 328 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 PNPOQ9NVS9 261 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 CLCF1Q9UBD9 225 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 HAO1Q9UJM8 370 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 ITGB1BP2Q9UKP3 347 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 PCDHGB4Q9UN71 923 aa15.57■□□□□ 0.08
PHRF1-204ENST00000532550 CCDC168Q8NDH2 2452 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 H3BML4 177 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 LBPP18428 481 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 RPS3AP61247 264 aaKnown RBP15.56■□□□□ 0.08
PHRF1-204ENST00000532550 HBA1P69905 142 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 OR4F3Q6IEY1 312 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 OR2A2Q6IF42 318 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 CAMKMTQ7Z624 323 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 ZAR1Q86SH2 424 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 GATSQ8NAP1 163 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 VPS37AQ8NEZ2 397 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 GPATCH2Q9NW75 528 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 VDAC3Q9Y277 283 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 AP4B1Q9Y6B7 739 aa15.56■□□□□ 0.08
PHRF1-204ENST00000532550 ANKHD1Q8IWZ3 2542 aaKnown RBP15.56■□□□□ 0.08
PHRF1-204ENST00000532550 CSMD2Q7Z408 3487 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 A0A087WZY1 265 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 A0A1W2PQD3 144 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 TMEM120BA0PK00 339 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 SLC22A20A6NK97 555 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 SEC14L5O43304 696 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 HCRTR2O43614 444 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 TNFRSF21O75509 655 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 TGM6O95932 706 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 SOAT1P35610 550 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 SUCLG1P53597 346 aaKnown RBP15.55■□□□□ 0.08
PHRF1-204ENST00000532550 LRRC34Q8IZ02 419 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 GCNT2Q8N0V5 402 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 ZNF527Q8NB42 609 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 OR8J2Q8NGG1 315 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 OR5AK3PQ8NH89 298 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 MGARPQ8TDB4 240 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 ACTRT2Q8TDY3 377 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 SMPDL3BQ92485 455 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 SH3YL1Q96HL8 342 aaPredicted RBP15.55■□□□□ 0.08
PHRF1-204ENST00000532550 PIGMQ9H3S5 423 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 THAP1Q9NVV9 213 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 NKIRAS1Q9NYS0 192 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 CRIM1Q9NZV1 1036 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 JKAMPQ9P055 326 aa15.55■□□□□ 0.08
PHRF1-204ENST00000532550 ANKRD17O75179 2603 aaKnown RBP15.55■□□□□ 0.08
PHRF1-204ENST00000532550 TUBAL3A6NHL2 446 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 DUXAA6NLW8 204 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 H0YC42 278 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms