RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TNFSF11O14788 317 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 CXCL13O43927 109 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 RSL1D1O76021 490 aaKnown RBP16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 OXSR1O95747 527 aaPredicted RBP16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 NID1P14543 1247 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 ZNF17P17021 662 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 GPC1P35052 558 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 PRKAG1P54619 331 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 PPP2R2BQ00005 443 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 IKBIPQ70UQ0 350 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 TRIM46Q7Z4K8 759 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 ZAR1Q86SH2 424 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 WDR75Q8IWA0 830 aaKnown RBP16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 CEP112Q8N8E3 955 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 LRRN4CLQ8ND94 238 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 OR4C3Q8NH37 302 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 FAM76AQ8TAV0 307 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 TMEM171Q8WVE6 324 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 ACTR6Q9GZN1 396 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 C12orf49Q9H741 205 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 TBK1Q9UHD2 729 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 ADAM21Q9UKJ8 722 aa16.48■□□□□ 0.23
SSSCA1-206ENST00000531405 ABCA1O95477 2261 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 PDPK1O15530 556 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 RIPK2O43353 540 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 NDUFB5O43674 189 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 CRCPO75575 148 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 GSTA1P08263 222 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 MYL2P10916 166 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 ACP2P11117 423 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 PRPS2P11908 318 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 PPP3CBP16298 524 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 MAP3K8P41279 467 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 NR1H2P55055 460 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 SLC18A2Q05940 514 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 SLC29A2Q14542 456 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 PLPPR5Q32ZL2 321 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 ZNF385BQ569K4 471 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 ALKBH2Q6NS38 261 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 FIGNL1Q6PIW4 674 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 ZYG11AQ6WRX3 759 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 FRMD7Q6ZUT3 714 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 SH2D5Q6ZV89 423 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 SZRD1Q7Z422 152 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 GTPBP8Q8N3Z3 284 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 ACMSDQ8TDX5 336 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 MZB1Q8WU39 189 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 HOXB13Q92826 284 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 OTUB1Q96FW1 271 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 SH3YL1Q96HL8 342 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 RNF145Q96MT1 663 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 FBXO34Q9NWN3 711 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 STOML1Q9UBI4 398 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 MCTS1Q9ULC4 181 aaKnown RBP16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 CCL27Q9Y4X3 112 aa16.47■□□□□ 0.23
SSSCA1-206ENST00000531405 CUBNO60494 3623 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 A0A0J9YW62 118 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 A0A1W2PPM1 405 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 A0A1W2PRB8 838 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 ALG1L2C9J202 215 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 HS3ST1O14792 307 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 SEC22BO75396 215 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 NKX2-2O95096 273 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 SYNGR4O95473 234 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 IL11P20809 199 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 PSMA4P25789 261 aaKnown RBP16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 ZNF844Q08AG5 666 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 KIAA0040Q15053 153 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 GLE1Q53GS7 698 aaKnown RBP16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 CLEC6AQ6EIG7 209 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 MFSD12Q6NUT3 480 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 NUP43Q8NFH3 380 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 OR2V1Q8NHB1 315 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 GIMAP5Q96F15 307 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 CXorf56Q9H5V9 222 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 RRAGDQ9NQL2 400 aaPredicted RBP16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 ZNF701Q9NV72 531 aaPredicted RBP16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 MED17Q9NVC6 651 aa16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 PSMC3IPQ9P2W1 217 aaPredicted RBP16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 WBP11Q9Y2W2 641 aaKnown RBP16.46■□□□□ 0.23
SSSCA1-206ENST00000531405 A0A087WZY1 265 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 TTC36A6NLP5 189 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 ADAMDEC1O15204 470 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 AKAP10O43572 662 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 KCNK2O95069 426 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 IFI6P09912 130 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 PAX1P15863 534 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 AGTR1P30556 359 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 ZNF41P51814 821 aaPredicted RBP16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 ATP5J2P56134 94 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 RAC1P63000 192 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 CAPRIN1Q14444 709 aaKnown RBP16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 HBMQ6B0K9 141 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 BEND4Q6ZU67 534 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 TRMT10CQ7L0Y3 403 aaKnown RBP16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 CDRT4Q8N9R6 151 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 SLC16A11Q8NCK7 471 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 RAB3IL1Q8TBN0 382 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 POC1BQ8TC44 478 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms