RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ADGRE4PQ86SQ3 457 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 MARCH3Q86UD3 253 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 RIMKLAQ8IXN7 391 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 COX18Q8N8Q8 333 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 SLC16A11Q8NCK7 471 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 OR7A2PQ8NGA2 310 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 SFXN5Q8TD22 340 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 ACTRT2Q8TDY3 377 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 ADAMTS15Q8TE58 950 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 FAM222BQ8WU58 562 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 NANOS1Q8WY41 292 aaKnown RBP8.7□□□□□ -1.02
CHD7-208ENST00000528280 C1GALT1C1Q96EU7 318 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 RMND5BQ96G75 393 aaPredicted RBP8.7□□□□□ -1.02
CHD7-208ENST00000528280 C3orf30Q96M34 536 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 TUBA1CQ9BQE3 449 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 DUSP26Q9BV47 211 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 ACTRT3Q9BYD9 372 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 MED11Q9P086 117 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 CACNA1CQ13936 2221 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 EXPH5Q8NEV8 1989 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 HCFC1P51610 2035 aa8.7□□□□□ -1.02
CHD7-208ENST00000528280 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 GXYLT2A0PJZ3 443 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 CLCA1A8K7I4 914 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 SKAP2O75563 359 aaPredicted RBP8.69□□□□□ -1.02
CHD7-208ENST00000528280 HMGN2P05204 90 aaKnown RBP8.69□□□□□ -1.02
CHD7-208ENST00000528280 G6PDP11413 515 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 EIF1P41567 113 aaKnown RBP8.69□□□□□ -1.02
CHD7-208ENST00000528280 PCYT1AP49585 367 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 STARP49675 285 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 ZNF136P52737 540 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 SORDQ00796 357 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 LRRC74AQ0VAA2 488 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 PTGR1Q14914 329 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 DUSP5Q16690 384 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 DPY19L1Q2PZI1 675 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 PGS1Q32NB8 556 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 GRAMD1BQ3KR37 738 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 PDSS1Q5T2R2 415 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 RAET1LQ5VY80 246 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 ATG16L1Q676U5 607 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 GTF2IRD2BQ6EKJ0 949 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 GTF2IRD2Q86UP8 949 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 GRAMD2AQ8IUY3 354 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 OR8J2Q8NGG1 315 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 OR4C3Q8NH37 302 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 RAB3IL1Q8TBN0 382 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 PIK3R3Q92569 461 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 JADE3Q92613 823 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 ARL8AQ96BM9 186 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 ZBTB8AQ96BR9 441 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 FAM120BQ96EK7 910 aaKnown RBP8.69□□□□□ -1.02
CHD7-208ENST00000528280 GIMAP5Q96F15 307 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 CHMP6Q96FZ7 201 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 PAIP2Q9BPZ3 127 aaKnown RBP8.69□□□□□ -1.02
CHD7-208ENST00000528280 DPY30Q9C005 99 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 AKTIPQ9H8T0 292 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 MED4Q9NPJ6 270 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 THAP1Q9NVV9 213 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 JKAMPQ9P055 326 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 HAO1Q9UJM8 370 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 RPH3AQ9Y2J0 694 aaPredicted RBP8.69□□□□□ -1.02
CHD7-208ENST00000528280 L3MBTL1Q9Y468 752 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 NCKAP5O14513 1909 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 ARHGAP21Q5T5U3 1957 aa8.69□□□□□ -1.02
CHD7-208ENST00000528280 PRSS51A0A1B0GVH4 220 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 TUBAL3A6NHL2 446 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 TRPC5OSA6NMA1 111 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 RNASET2O00584 256 aaKnown RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 HCRTR2O43614 444 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 ITM2AO43736 263 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 OXSR1O95747 527 aaPredicted RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 AK1P00568 194 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 ACP2P11117 423 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 FCGR2AP12318 317 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 ZNF17P17021 662 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 LBPP18428 481 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 ARRB2P32121 409 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 ZNF41P51814 821 aaPredicted RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 CLNS1AP54105 237 aaKnown RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 DLX5P56178 289 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 CLDN18P56856 261 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 B3GALT5-AS1P59052 145 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 STX5Q13190 355 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 DAZAP2Q15038 168 aaPredicted RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 SGCBQ16585 318 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 EXOSC6Q5RKV6 272 aaKnown RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 DCST1Q5T197 706 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 POMZP3Q6PJE2 187 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 SPATA19Q7Z5L4 167 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 WDR75Q8IWA0 830 aaKnown RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 C9orf106Q8NAJ2 232 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 NAXEQ8NCW5 288 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 OIT3Q8WWZ8 545 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 C16orf58Q96GQ5 468 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 C1orf50Q9BV19 199 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 FANCFQ9NPI8 374 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 SIRT3Q9NTG7 399 aaPredicted RBP8.68□□□□□ -1.02
CHD7-208ENST00000528280 EXD2Q9NVH0 621 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms