RNA–Protein interactions for RNA: ENST00000528256.1

PICALM-208, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 4

Gene PICALM, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-208	ENST00000528256	RGS11	O94810	467 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	TOX	O94900	526 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	CCNDBP1	O95273	360 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	RAF1	P04049	648 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	TPO	P07202	933 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	TPM1	P09493	284 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	ERG	P11308	486 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	CTNNA1	P35221	906 aa	Known RBP	5	□□□□□ -1.61
PICALM-208	ENST00000528256	RPA3	P35244	121 aa	Predicted RBP	5	□□□□□ -1.61
PICALM-208	ENST00000528256	HSD17B2	P37059	387 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	CETN2	P41208	172 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	TTPA	P49638	278 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	PRAME	P78395	509 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	ACVR1	Q04771	509 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	ACTN3	Q08043	901 aa	Predicted RBP	5	□□□□□ -1.61
PICALM-208	ENST00000528256	CDH17	Q12864	832 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	ARHGAP19	Q14CB8	494 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	FASTKD1	Q53R41	847 aa	Known RBP	5	□□□□□ -1.61
PICALM-208	ENST00000528256	ESCO2	Q56NI9	601 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	SHE	Q5VZ18	495 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	ATG16L1	Q676U5	607 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	ZNF534	Q76KX8	674 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	SHF	Q7M4L6	423 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	OTOA	Q7RTW8	1153 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	TBC1D26	Q86UD7	250 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	LRRC6	Q86X45	466 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	MARVELD2	Q8N4S9	558 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	CPSF7	Q8N684	471 aa	Known RBP	5	□□□□□ -1.61
PICALM-208	ENST00000528256	ANKRD42	Q8N9B4	389 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	POGLUT1	Q8NBL1	392 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	GJC3	Q8NFK1	279 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	OR52K1	Q8NGK4	314 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	OR9A4	Q8NGU2	314 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	OR51Q1	Q8NH59	317 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	MCOLN3	Q8TDD5	553 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	NRGN	Q92686	78 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	LPAR4	Q99677	370 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	NPAS2	Q99743	824 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	UCK2	Q9BZX2	261 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	SLC2A6	Q9UGQ3	507 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	PCYOX1	Q9UHG3	505 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	KCNG2	Q9UJ96	466 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	ANAPC5	Q9UJX4	755 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	RUVBL2	Q9Y230	463 aa	Known RBP	5	□□□□□ -1.61
PICALM-208	ENST00000528256	RNF6	Q9Y252	685 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	SPTB	P11277	2137 aa		5	□□□□□ -1.61
PICALM-208	ENST00000528256	CPAMD8	Q8IZJ3	1885 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	CCDC189	A1A4V9	331 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ERI2	A8K979	691 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	HSPB2	A8KAH6	182 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ARHGEF33	A8MVX0	844 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	NDC80	O14777	642 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	HAT1	O14929	419 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	TFEC	O14948	347 aa	Predicted RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	P2RX6	O15547	441 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	NSA2	O95478	260 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	PCNA	P12004	261 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	RPS3	P23396	243 aa	Known RBP eCLIP	4.99	□□□□□ -1.61	7e-25	■□□□□ 9.7
PICALM-208	ENST00000528256	MT3	P25713	68 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ATP5D	P30049	168 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	MAGEA1	P43355	309 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	XCR1	P46094	333 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	CYB561	P49447	251 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	NR1H2	P55055	460 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	RWDD2B	P57060	319 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	SLC26A5	P58743	744 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	MPP1	Q00013	466 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	POU3F1	Q03052	451 aa	Predicted RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	PRDX1	Q06830	199 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	SNTA1	Q13424	505 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	TSTA3	Q13630	321 aa	Predicted RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ABRAXAS2	Q15018	415 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	NSDHL	Q15738	373 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	HSPB2	Q16082	182 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	DEFB113	Q30KQ7	82 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ANKRD20A4	Q4UJ75	823 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	SFT2D3	Q587I9	215 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	CAVIN1	Q6NZI2	390 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ARHGAP11A	Q6P4F7	1023 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	PAPD4	Q6PIY7	484 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	SUSD1	Q6UWL2	747 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	PPP1R21	Q6ZMI0	780 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ADCK2	Q7Z695	626 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	PCGF5	Q86SE9	256 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	LDB1	Q86U70	411 aa	Predicted RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	RPS19BP1	Q86WX3	136 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	CCDC71	Q8IV32	467 aa	Predicted RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	PARP16	Q8N5Y8	322 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	OR9A1P	Q8NGU1	263 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	PEX13	Q92968	403 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	EBNA1BP2	Q99848	306 aa	Known RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	SMR3A	Q99954	134 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	P2RY12	Q9H244	342 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	FAM114A2	Q9NRY5	505 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	HCN3	Q9P1Z3	774 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	MALT1	Q9UDY8	824 aa		4.99	□□□□□ -1.61
PICALM-208	ENST00000528256	TAC3	Q9UHF0	121 aa		4.99	□□□□□ -1.61

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