RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 OR52E6Q96RD3 313 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 CGREF1Q99674 301 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 TXN2Q99757 166 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 FUZQ9BT04 418 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 INPP5KQ9BT40 448 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 PTDSS2Q9BVG9 487 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 ZNF717Q9BY31 904 aaPredicted RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 B3GNT4Q9C0J1 378 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 REXO4Q9GZR2 422 aaKnown RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 NT5DC2Q9H857 520 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 MYNNQ9NPC7 610 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 LHX9Q9NQ69 397 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 GLRX2Q9NS18 164 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 SLC6A13Q9NSD5 602 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 GID8Q9NWU2 228 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 HRASLS2Q9NWW9 162 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 CMTM6Q9NX76 183 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 NDE1Q9NXR1 346 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 TAS2R3Q9NYW6 316 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 PLA2G3Q9NZ20 509 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 NTMQ9P121 344 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 POMT2Q9UKY4 750 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 PSME2Q9UL46 239 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 NDRG4Q9ULP0 352 aaKnown RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 PRPF19Q9UMS4 504 aaKnown RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 SNX7Q9UNH6 387 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 USP22Q9UPT9 525 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 EXO1Q9UQ84 846 aaKnown RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 BTBD3Q9Y2F9 522 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 TSC22D4Q9Y3Q8 395 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 NEUROG3Q9Y4Z2 214 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 GMEB1Q9Y692 573 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 IGF2RP11717 2491 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 RTTNQ86VV8 2226 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 LAMA5O15230 3695 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 WDFY3Q8IZQ1 3526 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 ZFHX3Q15911 3703 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 MYO7BQ6PIF6 2116 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ZGRF1Q86YA3 2104 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TNRC6AQ8NDV7 1962 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 hCG_1807616A0A1W2PRN6 198 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 GXYLT2A0PJZ3 443 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 OR2A25A4D2G3 310 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 LRIT2A6NDA9 550 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PRORSD1PA6NEY8 169 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ZNF860A6NHJ4 632 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 LILRA5A6NI73 299 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC9B1P1A6NJY1 282 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 GABRR3A8MPY1 467 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 C2orf74A8MZ97 194 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 H0YGG7 62 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ERI3O43414 337 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 TNFSF14O43557 240 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 HCRTR1O43613 425 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TMPRSS11DO60235 418 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PRKRAO75569 313 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 TSPAN9O75954 239 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SEMA3DO95025 777 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PSMG1O95456 288 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TSPAN15O95858 294 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ECDO95905 644 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 C9P02748 559 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 EIF2S1P05198 315 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 IL6P05231 212 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 QDPRP09417 244 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 UBTFL6P0CB48 400 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 TMIGD3P0DMS9 266 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 PLA2G2AP14555 144 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 HPGDP15428 266 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 GNSP15586 552 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ST6GAL1P15907 406 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PORP16435 677 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 PRPS1L1P21108 318 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ATP6V1B2P21281 511 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 IL10P22301 178 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ME2P23368 584 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CERS1P27544 350 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PPIFP30405 207 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 UQCRC1P31930 480 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 AHRP35869 848 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CDKN2CP42773 168 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SSR2P43308 183 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 HAAOP46952 286 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CAPZBP47756 277 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PGDP52209 483 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 MAPK12P53778 367 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 OR1D5P58170 312 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 OR4D2P58180 307 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 VSX2P58304 361 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 RAB8AP61006 207 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 RPS15AP62244 130 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 CSNK2BP67870 215 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 MRPS22P82650 360 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 FOXM1Q08050 763 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CCNIQ14094 377 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 FLOT2Q14254 428 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 GNA13Q14344 377 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TBCEQ15813 527 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 CCDC6Q16204 474 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC5A12Q1EHB4 618 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms