RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 PRPS1L1P21108 318 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 OR1E1P30953 314 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SLC6A4P31645 630 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 THBS2P35442 1172 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 RFC3P40938 356 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 OR1E2P47887 323 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 WNT4P56705 351 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 KIAA1024LP59773 190 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 FABP5Q01469 135 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 DHODHQ02127 395 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TPBGQ13641 420 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 KCNA10Q16322 511 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 GSG1Q2KHT4 349 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ARTNQ5T4W7 220 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 HACD4Q5VWC8 232 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SBSNQ6UWP8 590 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 C6orf15Q6UXA7 325 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 DCXRQ7Z4W1 244 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 LRRC18Q8N456 261 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TOP6BLQ8N6T0 577 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TTC16Q8NEE8 873 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 OR52I1Q8NGK6 324 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 PPP1R35Q8TAP8 253 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SCARB1Q8WTV0 552 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 HSD17B8Q92506 261 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 KCNJ9Q92806 393 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 LRRC46Q96FV0 321 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 FCRL2Q96LA5 508 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 UBL7Q96S82 380 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 SLC38A3Q99624 504 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 CHST8Q9H2A9 424 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SEMA6CQ9H3T2 930 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 METTL17Q9H7H0 456 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 TPT1P8Q9HAU6 139 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 PDE7BQ9NP56 450 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ISYNA1Q9NPH2 558 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ELOVL2Q9NXB9 296 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 NDOR1Q9UHB4 597 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 GPR160Q9UJ42 338 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 FZD4Q9ULV1 537 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 GOLT1BQ9Y3E0 138 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 PCDHB11Q9Y5F2 797 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 DSPPQ9NZW4 1301 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 WDR90Q96KV7 1748 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TRDV1A0A1B0GX56 115 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 GABRR3A8MPY1 467 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 J3KTA2 159 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 LRRTM2O43300 516 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 GADD45GO95257 159 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 IFNGP01579 166 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 IGLV3-25P01717 112 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 OPN1SWP03999 348 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 NR2F6P10588 404 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TFPIP10646 304 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 EDNRBP24530 442 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ZNF140P52738 457 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 RAG2P55895 527 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ZP1P60852 638 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SKP1P63208 163 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 UAP1L1Q3KQV9 507 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 CDC73Q6P1J9 531 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 CASP12Q6UXS9 341 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ALKAL1Q6UXT8 129 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SERINC5Q86VE9 423 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 PAQR7Q86WK9 346 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ACOT12Q8WYK0 555 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 MAL2Q969L2 176 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 FOXRED1Q96CU9 486 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 MRPS24Q96EL2 167 aaKnown RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 MISP3Q96FF7 219 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 HMCESQ96FZ2 354 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 FUBP3Q96I24 572 aaKnown RBP eCLIP7.04□□□□□ -1.28
SOX6-208ENST00000527619 FCRL1Q96LA6 429 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 CDCA3Q99618 268 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 CMSS1Q9BQ75 279 aaKnown RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 SPRTNQ9H040 489 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 DNTTIP1Q9H147 329 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 WDR26Q9H7D7 661 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 EVA1AQ9H8M9 152 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 PRDM7Q9NQW5 492 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ACER3Q9NUN7 267 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 IMP3Q9NV31 184 aaKnown RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 CORO2BQ9UQ03 480 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 COL4A4P53420 1690 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR2AT4A6NND4 320 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 LOC730098B7Z3J9 87 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 HHLA1C9JL84 531 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 D6RAR5 112 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 EIF1AYO14602 144 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 PRRG1O14668 218 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 PRKYO43930 277 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 DNAJB6O75190 326 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 GCM2O75603 506 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 RECQL4O94761 1208 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 PDYNP01213 254 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SNRNP70P08621 437 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 LINC00614P0C842 121 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR8G3PP0DMU2 310 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms