RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CLCA3PQ9Y6N3 262 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CLSPNQ9HAW4 1339 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CCDC69A6NI79 296 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC9B1P1A6NJY1 282 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 RASGRF2O14827 1237 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 BUB1O43683 1085 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 KINO60870 393 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 GMNNO75496 209 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ANP32DO95626 131 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 TXNDC12O95881 172 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 OLFM2O95897 454 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 GSTA1P08263 222 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 NUDT17P0C025 328 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 HIST1H2AGP0C0S8 130 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 RNASE2P10153 161 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 RALAP11233 206 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 B4GALT1P15291 398 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 SERPINB6P35237 376 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 MAGEA4P43358 317 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 NME5P56597 212 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 GMFBP60983 142 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ACTA1P68133 377 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 IL9RQ01113 521 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ACTN3Q08043 901 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 KLF5Q13887 457 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 CARTPTQ16568 116 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 STX1AQ16623 288 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 TPD52L1Q16890 204 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC39A12Q504Y0 691 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC10A5Q5PT55 438 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 NKAIN2Q5VXU1 208 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 HIST2H2AA3Q6FI13 130 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 RTL6Q6ICC9 239 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 OR52W1Q6IF63 320 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 PRR5LQ6MZQ0 368 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 PODNL1Q6PEZ8 512 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 TMEM270Q6UE05 265 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 RBM43Q6ZSC3 357 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF713Q8N859 430 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ARL10Q8N8L6 244 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 NAT8LQ8N9F0 302 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 MLKLQ8NB16 471 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 SIDT2Q8NBJ9 832 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 OR2AP1Q8NGE2 309 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 EXOC6Q8TAG9 804 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 CCDC110Q8TBZ0 833 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 HAS2Q92819 552 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 HIST1H2ACQ93077 130 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 GLYATL1Q969I3 302 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 C18orf25Q96B23 403 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 FGGYQ96C11 551 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 VPS39Q96JC1 886 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 NOL4LQ96MY1 436 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 KCNK16Q96T55 309 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 DESI2Q9BSY9 194 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 FTHL17Q9BXU8 183 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 OSBPL8Q9BZF1 889 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 C1orf21Q9H246 121 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ZDHHC6Q9H6R6 413 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 PNPLA3Q9NST1 481 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ANO10Q9NW15 660 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 CWC25Q9NXE8 425 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 VPS54Q9P1Q0 977 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 TRIM10Q9UDY6 481 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 BCAP29Q9UHQ4 241 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 APPL1Q9UKG1 709 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF490Q9ULM2 529 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 PLA2G4CQ9UP65 541 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 ERVW-1Q9UQF0 538 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 CDH10Q9Y6N8 788 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 USP6P35125 1406 aa1.13□□□□□ -2.23
ECHDC1-219ENST00000526299 A0A0J9YVX5 310 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SMIM30A4D0T7 59 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 KRT87PA6NCN2 255 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SH2D1BO14796 132 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 NPIPB7O75200 414 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SEC22BO75396 215 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 AKAP3O75969 853 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC25A27O95847 323 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MT-ND3P03897 115 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 OR8U8P0C7N1 319 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 AHCYP23526 432 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MAPK3P27361 379 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 CALRP27797 417 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 TMOD1P28289 359 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SFNP31947 248 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MAGEB1P43366 347 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MNAT1P51948 309 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 HNRNPFP52597 415 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SRP54P61011 504 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 OSTNP61366 133 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 HMGN5P82970 282 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 OC90Q02509 493 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MAP2K1Q02750 393 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 BNIP1Q12981 228 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 PPP2R5CQ13362 524 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SNX1Q13596 522 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 GAMTQ14353 236 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms