RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 RUBCNLQ9H714 662 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 QPCTLQ9NXS2 382 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 PPP4R1LQ9P1A2 415 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
PTPRK-218ENST00000525459 SCO2O43819 266 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 UGT2B17O75795 530 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ANGPTL1O95841 491 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 DBIP07108 87 aaKnown RBP17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ZNF24P17028 368 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 RPS4Y1P22090 263 aaKnown RBP17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ADH7P40394 386 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 GAS1P54826 345 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 EEFSECP57772 596 aaKnown RBP17.1■□□□□ 0.33
PTPRK-218ENST00000525459 PLGLB1Q02325 96 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 CHRNEQ04844 493 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 MAPK11Q15759 364 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ADRM1Q16186 407 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 VMACQ2NL98 169 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 KLHL26Q53HC5 615 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 BICRALQ6AI39 1079 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 BNC2Q6ZN30 1099 aaPredicted RBP17.1■□□□□ 0.33
PTPRK-218ENST00000525459 PTOV1Q86YD1 416 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 OR2T12Q8NG77 320 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 OR1J4Q8NGS1 313 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 NFKBIDQ8NI38 313 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ZNF607Q96SK3 696 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ALG2Q9H553 416 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 GALNT9Q9HCQ5 603 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 AGPAT4Q9NRZ5 378 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 TUBA8Q9NY65 449 aaPredicted RBP17.1■□□□□ 0.33
PTPRK-218ENST00000525459 SLC35A3Q9Y2D2 325 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 IFT52Q9Y366 437 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ZFYVE26Q68DK2 2539 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 BOD1L1Q8NFC6 3051 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 AGAP5A6NIR3 686 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 B2RBV5 119 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 UBOX5O94941 541 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 PGM3O95394 542 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 THBS1P07996 1170 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 MSX1P28360 303 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 GZMMP51124 257 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 FOXO1Q12778 655 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 TIGD3Q6B0B8 471 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ZZZ3Q8IYH5 903 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ARHGAP24Q8N264 748 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ZNF614Q8N883 585 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 BHLHE22Q8NFJ8 381 aaPredicted RBP17.1■□□□□ 0.33
PTPRK-218ENST00000525459 TTTY12Q9BZ98 90 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 ARMC7Q9H6L4 198 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 CMTM6Q9NX76 183 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 FLRT3Q9NZU0 649 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 NCKAP5O14513 1909 aa17.1■□□□□ 0.33
PTPRK-218ENST00000525459 IGLV3-32A0A0A0MS00 114 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 A0A0G2JMM0 328 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 A0A1W2PPB8 328 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 A0A1W2PRS3 328 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 KIR3DP1A8MWS1 328 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 G3V3Y1 287 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 NME4O00746 187 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 ATP5HO75947 161 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 ZIC2O95409 532 aaPredicted RBP17.09■□□□□ 0.33
PTPRK-218ENST00000525459 FGFBP1Q14512 234 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 LARS2Q15031 903 aaKnown RBP17.09■□□□□ 0.33
PTPRK-218ENST00000525459 LIN52Q52LA3 116 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 PDZK1Q5T2W1 519 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 PATL1Q86TB9 770 aaKnown RBP17.09■□□□□ 0.33
PTPRK-218ENST00000525459 PLCZ1Q86YW0 608 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 WDR60Q8WVS4 1066 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 ZNF583Q96ND8 569 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 BBC3Q96PG8 261 aaPredicted RBP17.09■□□□□ 0.33
PTPRK-218ENST00000525459 PTGES2Q9H7Z7 377 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.09■□□□□ 0.33
PTPRK-218ENST00000525459 LUZP4Q9P127 313 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 TMEM181Q9P2C4 612 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 ZNF232Q9UNY5 417 aa17.09■□□□□ 0.33
PTPRK-218ENST00000525459 PRORSD1PA6NEY8 169 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 SERINC4A6NH21 518 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 TTLL8A6PVC2 850 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 SERPINB7O75635 380 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 CBR3O75828 277 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 GLSO94925 669 aaPredicted RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 T-ENOLP0DO92 83 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 NID1P14543 1247 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 IL7RP16871 459 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 RASSF2P50749 326 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 SUMO3P55854 103 aaPredicted RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 LIPEQ05469 1076 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 GANABQ14697 944 aaKnown RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 SAMD4BQ5PRF9 694 aaKnown RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 RNF220Q5VTB9 566 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 EIF3MQ7L2H7 374 aaKnown RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 MARCH3Q86UD3 253 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 FAM109AQ8N4B1 249 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 RBM15BQ8NDT2 890 aaKnown RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 TOR1AIP2Q8NFQ8 470 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 JSRP1Q96MG2 331 aaPredicted RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF703Q9H7S9 590 aaPredicted RBP17.08■□□□□ 0.32
PTPRK-218ENST00000525459 C15orf41Q9Y2V0 281 aa17.08■□□□□ 0.32
PTPRK-218ENST00000525459 NPIPA5A0A0B4J1W7 369 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms