RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SPTA1P02549 2419 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 TMPRSS11DO60235 418 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 CEACAM5P06731 702 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ITIH1P19827 911 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 RAB38P57729 211 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 CLRN1P58418 232 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ACTC1P68032 377 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ACTA1P68133 377 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ADAM8P78325 824 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 NR0B2Q15466 257 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SGCAQ16586 387 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 PAPD5Q8NDF8 572 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZMYND19Q96E35 227 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 WDR77Q9BQA1 342 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 WACQ9BTA9 647 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 IKZF5Q9H5V7 419 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 RLIMQ9NVW2 624 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SLC25A37Q9NYZ2 338 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 NEU3Q9UQ49 428 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF443Q9Y2A4 671 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 TMA7Q9Y2S6 64 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 PTRH2Q9Y3E5 179 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 LCMT2O60294 686 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 CISD3P0C7P0 127 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 CCNOP22674 350 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ARFRP1Q13795 201 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SLC48A1Q6P1K1 146 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 KCTD18Q6PI47 426 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 MAMDC2Q7Z304 686 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SAMD12Q8N8I0 201 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SLC16A11Q8NCK7 471 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 B3GNT7Q8NFL0 401 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 BPIFA2Q96DR5 249 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 BTBD2Q9BX70 525 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SAP130Q9H0E3 1048 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 LTBP1Q14766 1721 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 TRBV2A0A0J9YWF9 115 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SFTPA1Q8IWL2 248 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 EDAQ92838 391 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 MS4A6EQ96DS6 147 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 HIST1H2AAQ96QV6 131 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 PRR14Q9BWN1 585 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 DSN1Q9H410 356 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 CD93Q9NPY3 652 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ICKQ9UPZ9 632 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 IER3IP1Q9Y5U9 82 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 CSF2P04141 144 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 BMP1P13497 986 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 SFTPDP35247 375 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF385BQ569K4 471 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 HMBOX1Q6NT76 420 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 LRFN4Q6PJG9 635 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 TMEM64Q6YI46 380 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 MSANTD3Q96H12 275 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 NPLQ9BXD5 320 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 MROQ9BYG7 248 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 SP140LQ9H930 580 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 IFT46Q9NQC8 304 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 C1GALT1Q9NS00 363 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 CBLCQ9ULV8 474 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 SH3PXD2BA1X283 911 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 ANKRD33BA6NCL7 494 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 UBL4AP11441 157 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 SRFP11831 508 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 DAPP51397 102 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 GPNMBQ14956 572 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 PDSS1Q5T2R2 415 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 SPRED1Q7Z699 444 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 DNAJA4Q8WW22 397 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 TRUB1Q8WWH5 349 aaKnown RBP12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 OMA1Q96E52 524 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 CNN2Q99439 309 aaKnown RBP12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 SLC22A4Q9H015 551 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 SEMA6CQ9H3T2 930 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 GPN1Q9HCN4 374 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 RXFP3Q9NSD7 469 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 TRAV27A0A087WT01 109 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR5K3A6NET4 321 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 NPIPA2E9PIF3 369 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 NPIPA3F8WFD2 350 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 BMXP51813 675 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 PITPNAQ00169 270 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZP2Q05996 745 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 PPP1R3BQ86XI6 285 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 GPALPP1Q8IXQ4 340 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 ASB15Q8WXK1 588 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 TRIM63Q969Q1 353 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 PNPLA2Q96AD5 504 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR52D1Q9H346 318 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 ASB6Q9NWX5 421 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF225Q9UK10 706 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 CMAHPQ9Y471 501 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 GMEB1Q9Y692 573 aa12.24□□□□□ -0.45
PCDHGB1-201ENST00000523390 A0A1B0GVI7 797 aa12.23□□□□□ -0.45
PCDHGB1-201ENST00000523390 GYPBP06028 91 aa12.23□□□□□ -0.45
PCDHGB1-201ENST00000523390 S1PR1P21453 382 aa12.23□□□□□ -0.45
PCDHGB1-201ENST00000523390 CRHBPP24387 322 aa12.23□□□□□ -0.45
PCDHGB1-201ENST00000523390 ITGA3P26006 1051 aa12.23□□□□□ -0.45
PCDHGB1-201ENST00000523390 GIPRP48546 466 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms