RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 LYPLA1O75608 230 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 HMGN2P05204 90 aaKnown RBP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 TBXA2RP21731 343 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 SERPINB5P36952 375 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 ETV4P43268 484 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 EEF1A1P68104 462 aaKnown RBP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 FAM27E3Q08E93 113 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 MLC1Q15049 377 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 PON3Q15166 354 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 SGCBQ16585 318 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 GLYR1Q49A26 553 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 CPTPQ5TA50 214 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 EEF1A1P5Q5VTE0 462 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 OR2A2Q6IF42 318 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 PPP4R4Q6NUP7 873 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 WDR93Q6P2C0 686 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 ZCCHC12Q6PEW1 402 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 BTLAQ7Z6A9 289 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 NUDCD3Q8IVD9 361 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 CDS1Q92903 461 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 ZBTB9Q96C00 473 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 TUBGCP3Q96CW5 907 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 PGM2Q96G03 612 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 SH3YL1Q96HL8 342 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 OPN3Q9H1Y3 402 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 AP4B1Q9Y6B7 739 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 TEP1Q99973 2627 aaKnown RBP18.64■□□□□ 0.57
SDCBP-209ENST00000522243 SH3D21A4FU49 640 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 MSTNO14793 375 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 ITM2AO43736 263 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 C6orf47O95873 294 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 OPN1LWP04000 364 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 CRHP06850 196 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 HPGDP15428 266 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 DDX5P17844 614 aaKnown RBP18.63■□□□□ 0.57
SDCBP-209ENST00000522243 DNASE1P24855 282 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 RPL3P39023 403 aaKnown RBP18.63■□□□□ 0.57
SDCBP-209ENST00000522243 KIR2DL2P43627 348 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-209ENST00000522243 RPS3AP61247 264 aaKnown RBP18.63■□□□□ 0.57
SDCBP-209ENST00000522243 POU6F2P78424 691 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-209ENST00000522243 TMEM44Q2T9K0 475 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 KRT71Q3SY84 523 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 EXOSC6Q5RKV6 272 aaKnown RBP18.63■□□□□ 0.57
SDCBP-209ENST00000522243 PPP1R14CQ8TAE6 165 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 PPP1R36Q96LQ0 422 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 DACH2Q96NX9 599 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 FOXC2Q99958 501 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 KLHDC3Q9BQ90 382 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 CXorf36Q9H7Y0 433 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 ZNF395Q9H8N7 513 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-209ENST00000522243 SPG11Q96JI7 2443 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 AKAP9Q99996 3911 aa18.63■□□□□ 0.57
SDCBP-209ENST00000522243 NPIPA5A0A0B4J1W7 369 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 NPIPA7E9PJI5 369 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 EIF1AYO14602 144 aaKnown RBP18.62■□□□□ 0.57
SDCBP-209ENST00000522243 NGFRP08138 427 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 NPIPA8P0DM63 369 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 SERPINB4P48594 390 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 CCT3P49368 545 aaKnown RBP18.62■□□□□ 0.57
SDCBP-209ENST00000522243 RNF144AP50876 292 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-209ENST00000522243 TP53BP2Q13625 1128 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 GGNQ86UU5 652 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 METTL25Q8N6Q8 603 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 OR5P2Q8WZ92 322 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 TMEM109Q9BVC6 243 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 BTBD2Q9BX70 525 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 RNF122Q9H9V4 155 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 UBQLN4Q9NRR5 601 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 GIN1Q9NXP7 522 aa18.62■□□□□ 0.57
SDCBP-209ENST00000522243 NUP214P35658 2090 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-209ENST00000522243 PRRC2AP48634 2157 aaKnown RBP18.61■□□□□ 0.57
SDCBP-209ENST00000522243 SCDO00767 359 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 CASKO14936 926 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 CFLARO15519 480 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 CTIFO43310 598 aaKnown RBP18.61■□□□□ 0.57
SDCBP-209ENST00000522243 AQP8O94778 261 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 HSPA4LO95757 839 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 HRGP04196 525 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 EIF1AXP47813 144 aaKnown RBP18.61■□□□□ 0.57
SDCBP-209ENST00000522243 CD226Q15762 336 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 SPDYE7PQ495Y7 208 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 CDC73Q6P1J9 531 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 ZNF474Q6S9Z5 364 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-209ENST00000522243 COQ8BQ96D53 544 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 STACQ99469 402 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 CXXC4Q9H2H0 198 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 PIGUQ9H490 435 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 MED17Q9NVC6 651 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 ATAD3AQ9NVI7 634 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 NDRG3Q9UGV2 375 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 EIF3LQ9Y262 564 aaKnown RBP18.61■□□□□ 0.57
SDCBP-209ENST00000522243 ZNF175Q9Y473 711 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 KCNE3Q9Y6H6 103 aa18.61■□□□□ 0.57
SDCBP-209ENST00000522243 AKAP6Q13023 2319 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 A0A1W2PPR1 153 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 RGS16O15492 202 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-209ENST00000522243 G6PDP11413 515 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 SLC6A8P48029 635 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 ZNF41P51814 821 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms