RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 TPD52P55327 224 aaPredicted RBP23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 CLDN20P56880 219 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 SGCBQ16585 318 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 CPTPQ5TA50 214 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 WDR93Q6P2C0 686 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 NATD1Q8N6N6 113 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 FNDC5Q8NAU1 212 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 CHDHQ8NE62 594 aaPredicted RBP23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 PPP1R14CQ8TAE6 165 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 FIG4Q92562 907 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 CAVIN3Q969G5 261 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 STARD4Q96DR4 205 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 FAM120BQ96EK7 910 aaKnown RBP23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 UBQLN4Q9NRR5 601 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 ZDHHC2Q9UIJ5 367 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 VDAC3Q9Y277 283 aa23.37■■□□□ 1.33
LAPTM4B-203ENST00000521545 A0A087WZY1 265 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 RIPPLY3P57055 190 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 POU6F2P78424 691 aaPredicted RBP23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 C6orf136Q5SQH8 315 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 IL23RQ5VWK5 629 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 NUDCD3Q8IVD9 361 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 GATSQ8NAP1 163 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 PGM2Q96G03 612 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 C3orf30Q96M34 536 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 C1orf50Q9BV19 199 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 TMEM109Q9BVC6 243 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 BTBD2Q9BX70 525 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 PCNX3Q9H6A9 2034 aa23.36■■□□□ 1.33
LAPTM4B-203ENST00000521545 SCDO00767 359 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 SKAP2O75563 359 aaPredicted RBP23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 HMGN2P05204 90 aaKnown RBP23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 LAMP1P11279 417 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 CREB1P16220 341 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 OCRLQ01968 901 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 FGFBP1Q14512 234 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 PON3Q15166 354 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 LSM12Q3MHD2 195 aaKnown RBP23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 MISPQ8IVT2 679 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 FNDC9Q8TBE3 224 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 OR5P2Q8WZ92 322 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 TUBGCP3Q96CW5 907 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 OTUB1Q96FW1 271 aaPredicted RBP23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 STACQ99469 402 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 CXXC4Q9H2H0 198 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 DUSP22Q9NRW4 184 aa23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 SIRT3Q9NTG7 399 aaPredicted RBP23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 EIF3LQ9Y262 564 aaKnown RBP23.35■■□□□ 1.33
LAPTM4B-203ENST00000521545 SHISA8B8ZZ34 492 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 CTIFO43310 598 aaKnown RBP23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 ZNF17P17021 662 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 ARRB2P32121 409 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 CCT3P49368 545 aaKnown RBP23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 SIRPAP78324 504 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 LASP1Q14847 261 aaKnown RBP23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 PTGR1Q14914 329 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 TMEM44Q2T9K0 475 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 SPDYE7PQ495Y7 208 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 VWA1Q6PCB0 445 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 CAMKMTQ7Z624 323 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 BTLAQ7Z6A9 289 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 ZAR1Q86SH2 424 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 WDR75Q8IWA0 830 aaKnown RBP23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 METTL25Q8N6Q8 603 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 ZNF845Q96IR2 970 aaPredicted RBP23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 PRRG4Q9BZD6 226 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 RNF122Q9H9V4 155 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 FBXO34Q9NWN3 711 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 GIN1Q9NXP7 522 aa23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 FAF1Q9UNN5 650 aaPredicted RBP23.34■■□□□ 1.33
LAPTM4B-203ENST00000521545 EIF1AYO14602 144 aaKnown RBP23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 TYROBPO43914 113 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 SOX30O94993 753 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 FCGR2AP12318 317 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 PRPS1L1P21108 318 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 ATP6V1C1P21283 382 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 KIR2DL2P43627 348 aaPredicted RBP23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 ZNF41P51814 821 aaPredicted RBP23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 MAD2L1Q13257 205 aaPredicted RBP23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 KRT71Q3SY84 523 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 CCNJQ5T5M9 372 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 PPP4R4Q6NUP7 873 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 PAMR1Q6UXH9 720 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 OR56A1Q8NGH5 318 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 ACTRT2Q8TDY3 377 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 ZBTB8AQ96BR9 441 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 SLC39A3Q9BRY0 314 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 ACTRT3Q9BYD9 372 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 PIGUQ9H490 435 aa23.33■■□□□ 1.33
LAPTM4B-203ENST00000521545 HRNRQ86YZ3 2850 aaPredicted RBP23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 ITPR3Q14573 2671 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 CFLARO15519 480 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 RAF1P04049 648 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 KRT16P08779 473 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 CD79BP40259 229 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 EIF1AXP47813 144 aaKnown RBP23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 PCYT1AP49585 367 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 FAM27E3Q08E93 113 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 TP53BP2Q13625 1128 aa23.32■■□□□ 1.32
LAPTM4B-203ENST00000521545 KEAP1Q14145 624 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms