RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ATP6V1C1P21283 382 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 STARP49675 285 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 CASP9P55211 416 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 B3GALT5-AS1P59052 145 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 GANABQ14697 944 aaKnown RBP18.72■□□□□ 0.59
TRIM35-203ENST00000521253 AAGABQ6PD74 315 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 C1GALT1C1Q96EU7 318 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 OR52E6Q96RD3 313 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 PTGES2Q9H7Z7 377 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 CHST11Q9NPF2 352 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 ZIM2Q9NZV7 527 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 Q9UFV3 132 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 NOTCH2Q04721 2471 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 NPIPA5A0A0B4J1W7 369 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 DUXAA6NLW8 204 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 NPIPA7E9PJI5 369 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 C19orf84I3L1E1 186 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 SCDO00767 359 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 GMFGO60234 142 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 EPPINO95925 133 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 NPIPA8P0DM63 369 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 CPN1P15169 458 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 HK1P19367 917 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 CHMP24386 653 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 ZFP36L2P47974 494 aaKnown RBP18.71■□□□□ 0.59
TRIM35-203ENST00000521253 IDH3AP50213 366 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 LHX2P50458 406 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 SAXO2Q658L1 398 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 ENPP6Q6UWR7 440 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 LILRB4Q8NHJ6 448 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 MIPOL1Q8TD10 442 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 NEURL3Q96EH8 262 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 MAGEB18Q96M61 343 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 PANX1Q96RD7 426 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 EBF4Q9BQW3 602 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 SLC35A5Q9BS91 424 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 INPP5KQ9BT40 448 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 OR51I1Q9H343 314 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 ACBD3Q9H3P7 528 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 TCF7L2Q9NQB0 619 aa18.71■□□□□ 0.59
TRIM35-203ENST00000521253 NAV2Q8IVL1 2488 aa18.71■□□□□ 0.58
TRIM35-203ENST00000521253 A0A1W2PQD3 144 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 POLR3GO15318 223 aaPredicted RBP18.7■□□□□ 0.58
TRIM35-203ENST00000521253 TOXO94900 526 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 C1QCP02747 245 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 IL6P05231 212 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 CDKN2CP42773 168 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 SRYQ05066 204 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 CD226Q15762 336 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 FLYWCH1Q4VC44 716 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 RIPPLY2Q5TAB7 128 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 RAET1LQ5VY80 246 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 ARSKQ6UWY0 536 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 CHDHQ8NE62 594 aaPredicted RBP18.7■□□□□ 0.58
TRIM35-203ENST00000521253 OR9I1Q8NGQ6 314 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 PHF3Q92576 2039 aaKnown RBP18.7■□□□□ 0.58
TRIM35-203ENST00000521253 SDF2Q99470 211 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 UCK2Q9BZX2 261 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 HOXD1Q9GZZ0 328 aa18.7■□□□□ 0.58
TRIM35-203ENST00000521253 ITPR2Q14571 2701 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 CCDC154A6NI56 674 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 FAM90A27PA6NNH2 459 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 FAM47E-STBD1D6RA91 191 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 NPIPB9F8W1W9 429 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 AK1P00568 194 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 CHI3L1P36222 383 aaPredicted RBP18.69■□□□□ 0.58
TRIM35-203ENST00000521253 AQP5P55064 265 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 CLDN18P56856 261 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 LRRC74AQ0VAA2 488 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 SF3B4Q15427 424 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRIM35-203ENST00000521253 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRIM35-203ENST00000521253 NSUN5P2Q63ZY6 315 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 TNFAIP8L2Q6P589 184 aaPredicted RBP18.69■□□□□ 0.58
TRIM35-203ENST00000521253 LACC1Q8IV20 430 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 MISPQ8IVT2 679 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 MIER2Q8N344 545 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 TRIML2Q8N7C3 387 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 OR5M1Q8NGP8 315 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 ZPLD1Q8TCW7 415 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 SH3YL1Q96HL8 342 aaPredicted RBP18.69■□□□□ 0.58
TRIM35-203ENST00000521253 TRIB1Q96RU8 372 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 TUBA1CQ9BQE3 449 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 HHATLQ9HCP6 504 aa18.69■□□□□ 0.58
TRIM35-203ENST00000521253 CACNA1CQ13936 2221 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 OR2M5A3KFT3 312 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 NKX2-6A6NCS4 301 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 H0Y3Z8 333 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 GSNP06396 782 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 OR12D1P0DN82 309 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 ZNF708P17019 499 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 MSX1P28360 303 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 RNF144AP50876 292 aaPredicted RBP18.68■□□□□ 0.58
TRIM35-203ENST00000521253 ATP12AP54707 1039 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 RCAN2Q14206 197 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 KLHL26Q53HC5 615 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 HEPHL1Q6MZM0 1159 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 ZNF621Q6ZSS3 439 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 OLIG3Q7RTU3 272 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 LIX1LQ8IVB5 337 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 ZNF527Q8NB42 609 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms