RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ATP6V0A1Q93050 837 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 EEF2KMTQ96G04 330 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 ZNF560Q96MR9 790 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 NAP1L3Q99457 506 aaPredicted RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 TEX13AQ9BXU3 409 aaPredicted RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 PLA2G2FQ9BZM2 168 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 NACA2Q9H009 215 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 DDX47Q9H0S4 455 aaKnown RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 GHRLQ9UBU3 117 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 FAM153AQ9UHL3 310 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 SCML2Q9UQR0 700 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 TDRKHQ9Y2W6 561 aaKnown RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 PTCH1Q13635 1447 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 IGHV7-81A0A0B4J1V7 117 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 TRIM64A6NGJ6 449 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 TRIM64BA6NI03 449 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 INSP01308 110 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 MMP1P03956 469 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 GCKP35557 465 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 CTRLP40313 264 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 PMELP40967 661 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 AP1B1Q10567 949 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 CBX3Q13185 183 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 TSTA3Q13630 321 aaPredicted RBP2.45□□□□□ -2.02
SKP1-207ENST00000520417 LASP1Q14847 261 aaKnown RBP2.45□□□□□ -2.02
SKP1-207ENST00000520417 PKN2Q16513 984 aaKnown RBP2.45□□□□□ -2.02
SKP1-207ENST00000520417 SYPL1Q16563 259 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 PARP6Q2NL67 630 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 PAGE3Q5JUK9 113 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 YRDCQ86U90 279 aaKnown RBP2.45□□□□□ -2.02
SKP1-207ENST00000520417 MGARPQ8TDB4 240 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 BLOC1S5Q8TDH9 187 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 RSPH9Q9H1X1 276 aaPredicted RBP2.45□□□□□ -2.02
SKP1-207ENST00000520417 TMEM245Q9H330 911 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 HMG20BQ9P0W2 317 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 SPRR3Q9UBC9 169 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 UBQLN1Q9UMX0 589 aaKnown RBP2.45□□□□□ -2.02
SKP1-207ENST00000520417 EXOSC1Q9Y3B2 195 aaKnown RBP2.45□□□□□ -2.02
SKP1-207ENST00000520417 CDH10Q9Y6N8 788 aa2.45□□□□□ -2.02
SKP1-207ENST00000520417 IGLV4-60A0A075B6I1 120 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 TLR4O00206 839 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 VEGFDO43915 354 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 BAG2O95816 211 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 JCHAINP01591 159 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 ABHD2P08910 425 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 ZNF823P16415 610 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 ATP6V1E1P36543 226 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 CNN1P51911 297 aaKnown RBP2.44□□□□□ -2.02
SKP1-207ENST00000520417 APOC4P55056 127 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 HERVK_113P61574 105 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 MRPS11P82912 194 aaKnown RBP2.44□□□□□ -2.02
SKP1-207ENST00000520417 ZNF154Q13106 437 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 DNM1P46Q6ZS02 220 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 CNTN4Q8IWV2 1026 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 BPIFB2Q8N4F0 458 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 ZNF740Q8NDX6 193 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 NEK11Q8NG66 645 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 TRUB1Q8WWH5 349 aaKnown RBP2.44□□□□□ -2.02
SKP1-207ENST00000520417 DTD2Q96FN9 168 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 SPATA13Q96N96 652 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 TXN2Q99757 166 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 SLC17A9Q9BYT1 436 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 THAP9Q9H5L6 903 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 CAB39LQ9H9S4 337 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 PRMT8Q9NR22 394 aaPredicted RBP2.44□□□□□ -2.02
SKP1-207ENST00000520417 MMP26Q9NRE1 261 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 NECAP2Q9NVZ3 263 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 ZNF225Q9UK10 706 aa2.44□□□□□ -2.02
SKP1-207ENST00000520417 PRPF19Q9UMS4 504 aaKnown RBP2.44□□□□□ -2.02
SKP1-207ENST00000520417 IMPA2O14732 288 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 CASKO14936 926 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 RAMP1O60894 148 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 OLFM2O95897 454 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 SLC35G4P0C7Q5 338 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 IGLL1P15814 213 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 HNRNPA2B1P22626 353 aaKnown RBP2.43□□□□□ -2.02
SKP1-207ENST00000520417 HNRNPFP52597 415 aaKnown RBP2.43□□□□□ -2.02
SKP1-207ENST00000520417 SUCLG1P53597 346 aaKnown RBP2.43□□□□□ -2.02
SKP1-207ENST00000520417 SRP54P61011 504 aaKnown RBP2.43□□□□□ -2.02
SKP1-207ENST00000520417 VLDLRP98155 873 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 HFEQ30201 348 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 DNAJC21Q5F1R6 531 aaKnown RBP2.43□□□□□ -2.02
SKP1-207ENST00000520417 BTNL3Q6UXE8 466 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 GOLGA7Q7Z5G4 137 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 FAM71E2Q8N5Q1 922 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 LRRC17Q8N6Y2 441 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 TPRX1Q8N7U7 411 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 OR2T33Q8NG76 320 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 WDR36Q8NI36 951 aaKnown RBP2.43□□□□□ -2.02
SKP1-207ENST00000520417 NDUFAF3Q9BU61 184 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 CYP39A1Q9NYL5 469 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 STRAPQ9Y3F4 350 aaKnown RBP2.43□□□□□ -2.02
SKP1-207ENST00000520417 TEX264Q9Y6I9 313 aa2.43□□□□□ -2.02
SKP1-207ENST00000520417 THSD7BQ9C0I4 1608 aa2.42□□□□□ -2.02
SKP1-207ENST00000520417 RAD54L2Q9Y4B4 1467 aa2.42□□□□□ -2.02
SKP1-207ENST00000520417 METP08581 1390 aa2.42□□□□□ -2.02
SKP1-207ENST00000520417 KIR2DL5BA0A0G2JN68 375 aa2.42□□□□□ -2.02
SKP1-207ENST00000520417 KIR2DL5BA0A0G2JPC4 375 aa2.42□□□□□ -2.02
SKP1-207ENST00000520417 TRBV2A0A0J9YWF9 115 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms