RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 OR6C65A6NJZ3 312 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR7A17O14581 309 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 EFNA2O43921 213 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 SURF6O75683 361 aaKnown RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 SERPINB2P05120 415 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 CT45A10P0DMU9 189 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 CDH5P33151 784 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 BDKRB1P46663 353 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 CSRP3P50461 194 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 RPL8P62917 257 aaKnown RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 MS4A2Q01362 244 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 MAP2K1Q02750 393 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 COX10Q12887 443 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 IL18R1Q13478 541 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 ABRAXAS2Q15018 415 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 PPP1R3AQ16821 1122 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 MRGPRG-AS1Q2M3A8 158 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 FILIP1LQ4L180 1135 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 NHLRC3Q5JS37 347 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 PVRIGQ6DKI7 326 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR8G2PQ6IF36 304 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 ACSM5Q6NUN0 579 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 FAHD2BQ6P2I3 314 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 Q6ZPB1 254 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 KIAA1328Q86T90 577 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF440Q8IYI8 595 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR10A7Q8NGE5 316 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 M1APQ8TC57 530 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 AENQ8WTP8 325 aaKnown RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 TFB1MQ8WVM0 346 aaKnown RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 FAHD2AQ96GK7 314 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 SH3YL1Q96HL8 342 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 AMDHD1Q96NU7 426 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 TGM7Q96PF1 710 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC6A7Q99884 636 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 HCAR1Q9BXC0 346 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 TRIM15Q9C019 465 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 OPN3Q9H1Y3 402 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 ADNPQ9H2P0 1102 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 UFSP2Q9NUQ7 469 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 NOTCH4Q99466 2003 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 USP6P35125 1406 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 CNTNAP2Q9UHC6 1331 aa4.21□□□□□ -1.74
HMGB1P46-201ENST00000520062 UBXN8O00124 270 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 MSH4O15457 936 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 SCGNO76038 276 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 HOXD4P09016 255 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 DBTP11182 482 aaKnown RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 PBLDP30039 288 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ELK3P41970 407 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ALDH3B2P48448 385 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 CEBPDP49716 269 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ARHGDIBP52566 201 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 AIF1P55008 147 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 NCBP1Q09161 790 aaKnown RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZMYND11Q15326 602 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 RABL6Q3YEC7 729 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 PAQR6Q6TCH4 344 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 SYT10Q6XYQ8 523 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF497Q6ZNH5 498 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 NLRP9Q7RTR0 991 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 APTXQ7Z2E3 356 aaKnown RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 MOB3BQ86TA1 216 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ACOT1Q86TX2 421 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC47A2Q86VL8 602 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC22A18ASQ8N1D0 253 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 FGFRL1Q8N441 504 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 BHLHE23Q8NDY6 225 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 STXBP6Q8NFX7 210 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 CNIH3Q8TBE1 160 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ITLN1Q8WWA0 313 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 PIGCQ92535 297 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 TMEM80Q96HE8 168 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 C12orf66Q96MD2 445 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF599Q96NL3 588 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 TUBGCP2Q9BSJ2 902 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 TCHPQ9BT92 498 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 EDEM2Q9BV94 578 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 CRNKL1Q9BZJ0 848 aaKnown RBP4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 GNB4Q9HAV0 340 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 TIGARQ9NQ88 270 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 DCAF16Q9NXF7 216 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 PCSK1NQ9UHG2 260 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF221Q9UK13 617 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 FRMPD4Q14CM0 1322 aa4.2□□□□□ -1.74
HMGB1P46-201ENST00000520062 TRAV26-1A0A087WT03 109 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 METTL21EPA6NDL7 271 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 PCP4L1A6NKN8 68 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 E9PQ18 207 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC17A2O00624 439 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 LRRTM2O43300 516 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 SH3BGRLO75368 114 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 KBTBD11O94819 623 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 F10P00742 488 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 IL1BP01584 269 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 LAP3P28838 519 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 HPCAL1P37235 193 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 GRIA1P42261 906 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 RPL34P49207 117 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms